Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00949 ATGCCATGTTTTATGTTCCTGCATATAGCTTCTAAAGATTTTGTCGCTCTACACTTTGCTCTAATGGTTTCCAAAAGATACAGTTCCTCATATTACACAAAGGAGTTCTTAACTTTACTCTTGCTGTTCCTATTTAGCTTCCAGAACAGTACTGTTGAGTGCCAGGGAAGGTTGAATAAACAGAACTATTCAGAATCAGAAACTGAGTATCCATCAAGGCCTTCACAAGATAAGGAAGACTTGCGCAAGATTATCATTAGTGTTGTTCTGGGATCAGTCACTGGATTAGTTGGCTCCGTTTTGTTTGCTCTTATAGTCCGTTGCTTTGTTCAGTATCTGAATCAAACCCCAATACTGAAGGGGCCTGTCATATTTTCCCCCAAAATTTCTCCTAAGACACTCCAATCAGCTTTGGCAAAAGAAAACCATTTGCTTGGTTCAAGCCTAAATGGTAGATGTTACAGAACGGTGCTTGACAATGGGCTCACTATTGCAGTGAAGAGGCTAACACCCTTTGAACCCGGTTCTCCGGAGATAAGGAAAAAGAGGGTTAAGAGAGAAATACAGAAGGAGCTGGAAGTGCTTGCTAGTCTAAGGCATAGGAATTTGATGAGCTTAAGGGCTTATGTTCGTGAACCTGATAGTTTTTCCTTGGTTTATGATTATGTCGCCAAGGGCAGCCTTGCTGATGCAATGAACAGAGCTAAGGAAAGCGAGTTTCCGCCGCTTGGTTGGGAACATAGGCTGAGGATTGCTATTGGGGTGGCTAAGGGGCTTCAGTATCTTCATTCTACTTGTGTTCCTCAGATTCTGCACTACAACCTTAAGCCCTCCAATGTGATGTTGGATGCCGAGTTTGAACCTAGGTTGTCTGATTATGGATTGGTTAAGCTTCTACCCAACTTGAATAGAGCCACATCTCCCTACACTCCTCCTGAATGCTTGCATAATTGCAGCAGGTACAGTGAGAAAAGTGACATATTCAGTTTTGGGATGATCTTGGGTGTATTATTAACAGGAAGGGATCCCAGAGATGCATTCTTTGAAGAAGCAGGGAATGGAGGGAGCATGCGGTGTTGGCTAAGGCAGTTGCAGGAAGCAGGAGAACCCAAGGAAGCGCTCGATAAGAGCCTCGTTCCCGTGACGGTAGGGGATGAAGAAGGTGATGAAGCCGATATGCTCATGGCTGTCAGGGTGGCCGCAGCGTGCCTCTCAGATGTGCCTGCAAATAGGCCTTCCAGTGATGAACTTGTTCACATGCTAACGCAACTTCACAGTTTTTGA 1284 0.4463 MPCFMFLHIASKDFVALHFALMVSKRYSSSYYTKEFLTLLLLFLFSFQNSTVECQGRLNKQNYSESETEYPSRPSQDKEDLRKIIISVVLGSVTGLVGSVLFALIVRCFVQYLNQTPILKGPVIFSPKISPKTLQSALAKENHLLGSSLNGRCYRTVLDNGLTIAVKRLTPFEPGSPEIRKKRVKREIQKELEVLASLRHRNLMSLRAYVREPDSFSLVYDYVAKGSLADAMNRAKESEFPPLGWEHRLRIAIGVAKGLQYLHSTCVPQILHYNLKPSNVMLDAEFEPRLSDYGLVKLLPNLNRATSPYTPPECLHNCSRYSEKSDIFSFGMILGVLLTGRDPRDAFFEEAGNGGSMRCWLRQLQEAGEPKEALDKSLVPVTVGDEEGDEADMLMAVRVAAACLSDVPANRPSSDELVHMLTQLHSF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00949 427 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 423 - -
Accr8g00949 427 ProSiteProfiles Protein kinase domain profile. 139 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00949 427 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 131 222 - -
Accr8g00949 427 Pfam Protein kinase domain 141 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00949 427 Gene3D Transferase(Phosphotransferase) domain 1 223 426 - -
Accr8g00949 427 Gene3D Phosphorylase Kinase; domain 1 119 222 - -
Accr8g00949 427 SUPERFAMILY Protein kinase-like (PK-like) 142 421 IPR011009 -
Accr8g00949 427 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00949 Accr-Chr8 23910721 23912787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00949 85 424 Receptor kinase-like Gene Family AT2G31880 32.410 1.36e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Accr8g00949 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00949 - - gmx:102664172 571.622