Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00946 ATGTTAATGGCCTTAGACCAGCAATTATCACTGGGTCCGAATCCCAATCCCGTGGATGGCCAAACTGACGGAACTACTAACGGCGTCGATTTCCGGCAGCCGTCCATCGACGCCGGAGAGGATGGCGTTAAGGCGCCGAGGCTGCCTCGTTGGACGAGACAGGAGATTCTGGTGCTGATACATGGCAAGAGGGATGCGGAGAATCAAATTCGAGGGAGTCGTAGTGCGGGTTTGCCATTTGGGACGGGTCAGCTTGAGCCGAAATGGGCTTCGGTATCATCGTACTGCAAAAGGCATGGAGTGAATAGAGGTCCCGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCTGGGGACTATAAGAAGATCAAGGAATGGGAATCTCAGATAAGGGACGATTCGGAATCGTTTTGGGTGATGAGAAACGATTTAAGGAGAGAGAAGAAATTGCCGGGATTTTTCGATAAGGAGGTCTATGACATTCTCGATTCCGGATCGCAGGCGCCGGCCTTATCTTTAGCTCTAGCATCGCCTCCCACTGGAGCTGTTCCGGTGGAAAAGAGGAAAGACAGTGGGGGAGTGGTGGCAGAGACAGCGGAGGCTGATACTGAGCCACACCTATATGATAGTCGGAGCGCTGCCGGAGAGGATGGCTTGTTCTCTGATTTCGAACAGGAAGAGGCAGGATTGAGTCCAGAAAAGGAAGCAGTGAAGAAAAATGCCTCAACACACACAACGCCTGTTATCCCAATCTCAGAGAAGCAATATCAACCACTTCTGCGAGGCTCTCAAGGTGAAGGAAATGCTCAAGGTGGGAGCAACGAGAAACGGCGAGGCTTGAATCCAGAAACAGGTTCTACATCTCAAGGAGGTCGAAAGAGGAAGCGGTTTCCAACAACGGATGAGGAAGATGAAATTCTGCAAAATCAATTGATTGATGTGTTGGAACGAAATGGGAAGATGCTGAGCGCCCAGCTCGAAGCCCAGAACCTAAATTTCCATTTGGACAGGGAGCAGAGGAAAGACCATGCTAGTCACTTAGTTGCTGTTCTTGATAAGCTTGCAGATGCTTTAGGCAGAATTGCTGATAAATTATAG 1095 0.4995 MLMALDQQLSLGPNPNPVDGQTDGTTNGVDFRQPSIDAGEDGVKAPRLPRWTRQEILVLIHGKRDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDDSESFWVMRNDLRREKKLPGFFDKEVYDILDSGSQAPALSLALASPPTGAVPVEKRKDSGGVVAETAEADTEPHLYDSRSAAGEDGLFSDFEQEEAGLSPEKEAVKKNASTHTTPVIPISEKQYQPLLRGSQGEGNAQGGSNEKRRGLNPETGSTSQGGRKRKRFPTTDEEDEILQNQLIDVLERNGKMLSAQLEAQNLNFHLDREQRKDHASHLVAVLDKLADALGRIADKL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00946 364 Pfam Myb/SANT-like DNA-binding domain 50 139 IPR044822 -
Accr8g00946 364 MobiDBLite consensus disorder prediction 176 213 - -
Accr8g00946 364 ProSiteProfiles Myb-like domain profile. 50 116 IPR001005 -
Accr8g00946 364 MobiDBLite consensus disorder prediction 240 292 - -
Accr8g00946 364 MobiDBLite consensus disorder prediction 1 45 - -
Accr8g00946 364 Gene3D - 51 121 - -
Accr8g00946 364 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 364 - -
Accr8g00946 364 MobiDBLite consensus disorder prediction 225 303 - -
Accr8g00946 364 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00946 Accr-Chr8 23807477 23810335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00946 50 124 Trihelix Transcription Factor Family AT1G33240 33.333 8.63e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr8g00946 Myb_DNA-bind_4 6.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00946 - - pcin:129308058 620.542