Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00922 ATGGAAAAGGAAGAGAAGAGGCTGAGTTTTGTGAGAAATGGTGAGCTAAGGTTACCACCTGGGTTTCGATTTCACCCAACAGACGAAGAGCTTGTGGTCCAATACTTGAAGCGAAAGGTCTTGTCTTATCCATTGCCTGCTTCAATCATCCCTGAGGTTCATGTCTGCAAATCGGATCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTTAGTACCAGAGAAGCTAAGTACTCTAATGGAAGCCGATCTAACAGAGCAACACATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATCCTGACTTCAAAGGGGAATCAAGTTGTGGGCATGAAGAAGACTCTGGTTTTCTACAGAGGCAAGCCTCCTCACGGCTCTAGAACTGACTGGATCATGCACGAATATCGCCTTCATAATATGCAGAGCTCTGAGGTGGGGATGCAGAGCTGGGTACTGTGTCGCATATTCTTGAAGAGAAGAAGCACAAACGGGAAAAGTGAGGAACAGAGTAGTTACAGAGTAAGAAGGGATATTATGAACAGTCACAACAAGTCAAGGCCTGTTTTTTATGATTTCTTAGCACAGAGCAAGAACAACAATAAGAATATTAATAATACTGATTTAAATCGCACACCTTCGTCTTCAACCTCAAGCATAAGTGGAATCACTCATATCTCTTCTCACGAATCTGATGAGCGTGGTGAAGAAAGCAGTAGTTACAACAGCTTGCCGTCCCTTACAAGAAACCCGTGA 768 0.4375 MEKEEKRLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNMQSSEVGMQSWVLCRIFLKRRSTNGKSEEQSSYRVRRDIMNSHNKSRPVFYDFLAQSKNNNKNINNTDLNRTPSSSTSSISGITHISSHESDERGEESSSYNSLPSLTRNP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00922 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 221 - -
Accr8g00922 255 SUPERFAMILY NAC domain 13 163 IPR036093 GO:0003677|GO:0006355
Accr8g00922 255 Gene3D NAC domain 27 168 IPR036093 GO:0003677|GO:0006355
Accr8g00922 255 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Accr8g00922 255 ProSiteProfiles NAC domain profile. 18 163 IPR003441 GO:0003677|GO:0006355
Accr8g00922 255 MobiDBLite consensus disorder prediction 206 230 - -
Accr8g00922 255 MobiDBLite consensus disorder prediction 206 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00922 Accr-Chr8 22759849 22761064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00922 8 248 NAC Transcription Factor Family AT5G13180 58.140 1.65e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g00922 NAM 2.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00922 - - qsa:O6P43_023807 334.339