Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00907 ATGACAGATCCCAAAGCAGTAGAAATAAAGGATTTCCAGATTATGATCGCAAACCAAGAAGGCGATCAGAAACAGTTAGGATCAGCAGTAACAAAGAAAGCTCCCAGAAAGGACCGTCACAAAAAGGTTAACGGCAGAGGAAGAAGAATAAGGATGCCTGCTCTGTGCGCCGCTAGGGTTTTTCAGTTAACTAGGGAGCTGGGTCACAAGTCAGACGGCGAGACGATTCAGTGGCTTCTTCAACAAGCAGAACCGTCCATCGTCGCCGCCACGGGGAGCGGCACAATCCCAGCTTCCGATCTAGCAGAAGCAGGATCCTCTGTTTCTGACCAGAGAAGTTCTGTTTCAAGCGGTTTGCATACAAAAGTGGAATCTTTAGGGCCAAGCTGGACGAAAATAAATGGGAATTTGGGAAGAACACCACCAGTAATCAATGGAGTTTGGCAAACTATAACTGGAATCAGTCCAGGGATCGTACAAAACTTGGGTTATTTGAGTTCAAGTTCTGGGTTTGAATTTGGTCGAATGAACTCATCAGGTTTCATGGAAGCAGCAGCAGCAGCACAAGAGCAGCAAGCTCCGGGTTTAGAACTGGGTCTGTCACAGGATGGTAATATTAGGGTTTTATCATCGGAAGCCATGACTCAGTTTTACCAGCAATTAGGTCAAAGTCGTGAAGTTGCAGGATCGTTGGTGCCTACCCAGAAGGATCATACTCACAGATCAAAACAGTGA 735 0.4639 MTDPKAVEIKDFQIMIANQEGDQKQLGSAVTKKAPRKDRHKKVNGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIVAATGSGTIPASDLAEAGSSVSDQRSSVSSGLHTKVESLGPSWTKINGNLGRTPPVINGVWQTITGISPGIVQNLGYLSSSSGFEFGRMNSSGFMEAAAAAQEQQAPGLELGLSQDGNIRVLSSEAMTQFYQQLGQSREVAGSLVPTQKDHTHRSKQ 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00907 244 MobiDBLite consensus disorder prediction 23 44 - -
Accr8g00907 244 Pfam TCP family transcription factor 35 122 IPR017887 -
Accr8g00907 244 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 174 IPR005333 GO:0003700
Accr8g00907 244 ProSiteProfiles TCP domain profile. 36 90 IPR017887 -
Accr8g00907 244 MobiDBLite consensus disorder prediction 101 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00907 Accr-Chr8 22181777 22182511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00907 7 218 TCP Transcription Factor Family AT3G27010 46.154 2.74e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr8g00907 TCP 4.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00907 - - pcin:129308950 399.823