Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00895 ATGCAACCTGGTTACAATATTAATGATCTGTACCAAGAAGCTCAAACGCGATGGCTGAAGCCTGTAGAAGTGATGTACATTTTACAGAATCATGAAAAGTATCAGATTACTCAAGGGACCCCACAACAGCCACAAAGTGGATCCTTGTTTCTGTTTAACAAAAGAGTTCTGCGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCACATGAACGACTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTATTATGCACATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTATGAGCATATTGTTCTGGTACACTACAGAGAAACAAGTGACGGAAGGTCAAATTCTGGACCTGGTACACAACAGTCGCCAGGACCCTCATCGACATTTAGTCAGAGTCCTAGCTCGTACACTACCCAGAAGCTAGGGTCAACATCCATGTTTGGTGATTCGTGTGAACCTAATCAGAGTTTCTCCAGTCCTCGATCAGTAGAATTCGCATCTGATATAGTCATCAAGAATAATGGAATGGATCACTTGGATGGAACAGAGGCAGAGTCAGGAAATTCAACTGCTGAAGCTCTGCGCCGACTGGAGGAGCAGTTAAGTCTGAATGAGGACAGCTTTAAAGAAATTGATTCCTTCAGCGGCGAGCAGGAGAATGCACATGATTCTAGTCCACAACAAAATACAGTGGCAATCAGCAATCAACCAGATGTTAATGCAACTTGGCCTGCACTGAGTGATCATGGCCAATCTTATGATGGGCGTAGTGCTAGACAAGACCATAATTGCTTTGATGGAATTGAGAAGACTTTGTATTGGAAGGAGATGTTGGATTCATGCAAACCCTTGTCCCCGGCCAGTTTGCAAGAGAAACACATGTACAGACCAGCTGGAAATGAAAACTCACTCTCGTCTTCAGGAAGCCTACCAATTGCTAACCATGAAAACAGTCACTGGATAGGCTTTGGCAGTAACAATGCTGAAAACTCTGCCTTTTCACTGAATCAAGACATTCATGGAGTCAGATTTTCTCCTTATTCTTCTATAGAAACTCAAGAAGCTAATTTGGATTGTTATGCATCATTTTTTGACCCAAACCAAATTGAAGCTCCTCTGGCTGTTGATTTAAGTTTGACCGTTGCACGAAAGCAAAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACAAAGGTTATAATTGTTGGATCATTTCTCTGTCTTCCCACGAGTTCTGCCTGGGCTTGTATGTTTGGTGAACATGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATCCGCTGTGAAGCTCCATCTCACCTTCCTCCTGGAAAGGTTACTCTCTGCGTTACCTCTGGGAATCGTGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGCCCTCACTGCAATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAACTGTTATTACTTGTTAGATTTGCACAGATGATCCTTTCCGATTCTTCTATAACAGAATCTGGAAATTATGAACTGGGAAAACAGAAATACGATGATGATTCATGGAGTCAAGTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGACAAGCTGCAGTTGTGGCTTTCCTCCATATCCCACAAAAGAAATGAAGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAATGGTTGGACTGCCCTGCATTGGGCTGCACGCTTTGGGAGGGAAAAAATGGTCGCTTCACTTTTAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAACAACCCAAGATCCAACTGGTAAAACGGTTGCTTCTATTGCAGCCAACAGTGGGCATACAGGTCTGGCAGGTTATCTTTCAGAGGTATCTCTAACAAGCCATTTATCTTCCCTCACCCTGGAAGAATGCGAGCTGTCTAAAGGTTCGGCTGAGCTTGAAGCAGAGTTAACTGTATGTACTGTCTCCAAGGAGCTTCTAACAGCCAGTGAAGATCAGATTTCACTCAAACATACCTTGGCTGCTGTGCGTAATGCAGCTCAAGCAGCTGCACGTATACAGTCTGCTTTTCGTGCACATTCCTTTAGGAAACGGAGAGAGAGAGAAGCTGCCATTTCTGCAGCAGCCGCCATATCAATTCAGAAGAAATATCGAGGATGGAAAGGCCGCAAAGATTTTTTAGCATTACGCAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTACAAGATAATATGTTGGGTAGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAAGAGGAAAGGAACCGGTTTACGAGGTTTTCGACAGGAGAGAAACTCAATTGATGAAACTGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGACGAAGCAGTTGAACAGGCTGTTTCACGGGTGCTGACCATGGTAGATTCTCCAAATGCTCGTCAACAATATCATCGCATGCTTGAAAAGTTTCGTCAAGCTAAGGCTGAACTCGGCAGCACAAGTCAAGGAGTGCCATTATCTTTTCTGAAGGATGCTTCCAATATGGAAGATGATGACTTAAATCAGTTTCCCTAG 2814 0.4357 MQPGYNINDLYQEAQTRWLKPVEVMYILQNHEKYQITQGTPQQPQSGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSDGRSNSGPGTQQSPGPSSTFSQSPSSYTTQKLGSTSMFGDSCEPNQSFSSPRSVEFASDIVIKNNGMDHLDGTEAESGNSTAEALRRLEEQLSLNEDSFKEIDSFSGEQENAHDSSPQQNTVAISNQPDVNATWPALSDHGQSYDGRSARQDHNCFDGIEKTLYWKEMLDSCKPLSPASLQEKHMYRPAGNENSLSSSGSLPIANHENSHWIGFGSNNAENSAFSLNQDIHGVRFSPYSSIETQEANLDCYASFFDPNQIEAPLAVDLSLTVARKQKFTIKEVSPEWGYATEATKVIIVGSFLCLPTSSAWACMFGEHEVPVEIIQDGVIRCEAPSHLPPGKVTLCVTSGNRESCSEVREFEYRNKDSCPHCNSLETESTRSPEELLLLVRFAQMILSDSSITESGNYELGKQKYDDDSWSQVIEALLVGSGTSSGTVDWLLEELLKDKLQLWLSSISHKRNEETGSSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLLASGASAGAVTDPTTQDPTGKTVASIAANSGHTGLAGYLSEVSLTSHLSSLTLEECELSKGSAELEAELTVCTVSKELLTASEDQISLKHTLAAVRNAAQAAARIQSAFRAHSFRKRREREAAISAAAAISIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQARKHYKIICWVVGFFDKAVLRWKRKGTGLRGFRQERNSIDETEDEDILKVFRKQKVDEAVEQAVSRVLTMVDSPNARQQYHRMLEKFRQAKAELGSTSQGVPLSFLKDASNMEDDDLNQFP 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00895 937 CDD IPT 407 492 - -
Accr8g00895 937 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 909 - -
Accr8g00895 937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 754 827 IPR027417 -
Accr8g00895 937 ProSiteProfiles IQ motif profile. 801 825 IPR000048 GO:0005515
Accr8g00895 937 Pfam IQ calmodulin-binding motif 780 798 IPR000048 GO:0005515
Accr8g00895 937 Pfam IQ calmodulin-binding motif 802 822 IPR000048 GO:0005515
Accr8g00895 937 MobiDBLite consensus disorder prediction 127 179 - -
Accr8g00895 937 Pfam IPT/TIG domain 407 491 IPR002909 -
Accr8g00895 937 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Accr8g00895 937 SMART CG_1_2 10 128 IPR005559 GO:0003677
Accr8g00895 937 Pfam Ankyrin repeats (3 copies) 615 693 IPR002110 GO:0005515
Accr8g00895 937 FunFam Calmodulin-binding transcription activator 2 777 825 - -
Accr8g00895 937 ProSiteProfiles Ankyrin repeat profile. 633 665 IPR002110 GO:0005515
Accr8g00895 937 ProSiteProfiles IQ motif profile. 778 807 IPR000048 GO:0005515
Accr8g00895 937 SMART ANK_2a 633 662 IPR002110 GO:0005515
Accr8g00895 937 SMART iq_5 777 799 IPR000048 GO:0005515
Accr8g00895 937 SMART iq_5 750 772 IPR000048 GO:0005515
Accr8g00895 937 SMART iq_5 800 822 IPR000048 GO:0005515
Accr8g00895 937 ProSiteProfiles Ankyrin repeat region circular profile. 633 659 - -
Accr8g00895 937 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Accr8g00895 937 Gene3D - 554 698 IPR036770 -
Accr8g00895 937 Gene3D Immunoglobulins 401 496 IPR013783 -
Accr8g00895 937 SUPERFAMILY Ankyrin repeat 602 694 IPR036770 -
Accr8g00895 937 Gene3D - 778 824 - -
Accr8g00895 937 ProSiteProfiles IQ motif profile. 751 780 IPR000048 GO:0005515
Accr8g00895 937 SUPERFAMILY E set domains 407 492 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00895 Accr-Chr8 21162269 21171625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00895 5 937 CAMTA Transcription Factor Family AT1G67310 50.639 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Accr8g00895 CG-1 3.5e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00895 K21596 - gmx:100786880 1201.42