Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00876 ATGGCGGAAGAAGTGAAAGATAACTCGATGAGACCAGAATTTCCGACCGGTCGAGTGAAGAAAATCATGAAGCTTGATCCAGAAGTTCAGAGGGTAAGTTCAGAAGCCTTGTTCCTGGTATCCTGCTCCACCGAGCTCTTCCTCCGTTTGCTGGCTGAAAAGTCTGCCCAAGTTGCCATCGAGAAGAAGCGCAAGATTGTGAAGCTTGAACACTTGAGAATCGCCGTCAAGAGGCACCAACCAACCAGCGACTTTCTGCTTGATTCGCTTCCTCTGCCCGCTCGGCCTGTTGATCGCCCGACCAAAGATCGGAGCCAATCTGGCCCTGATGCTGATAAGCTACCTCCGCCAGGTACTCGACGTATAGATCATTTCTTCCGAAAGCCAGAAGAAGCGCCAGAACCGAGAGTTGAGCCTTAG 420 0.5143 MAEEVKDNSMRPEFPTGRVKKIMKLDPEVQRVSSEALFLVSCSTELFLRLLAEKSAQVAIEKKRKIVKLEHLRIAVKRHQPTSDFLLDSLPLPARPVDRPTKDRSQSGPDADKLPPPGTRRIDHFFRKPEEAPEPRVEP 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00876 139 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Accr8g00876 139 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 9 95 - -
Accr8g00876 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Accr8g00876 139 SUPERFAMILY Histone-fold 12 91 IPR009072 GO:0046982
Accr8g00876 139 MobiDBLite consensus disorder prediction 116 139 - -
Accr8g00876 139 MobiDBLite consensus disorder prediction 85 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00876 4 128 CCAAT-HAP5 Transcription Factor Family AT5G43250 65.600 2.56e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr8g00876 CBFD_NFYB_HMF 1.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00876 - - qsa:O6P43_023858 190.274