Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00845 ATGGCAATTGAAGAGGAAATTAAGGCAGAGTTTGGAAGAAGTGGGTTTGACCTTGAAGATGAAGAAGAAATACTAAACAAATGTCTCCCATTTTGCATAAACTACAGTCTCAACCCTTCCGATCTGGTTTCAAGTTGGGAGGTTTATTATCTAAACAGACAGCTGAATGGATCAACAGTTCAAAGTGCTGAAATAGATGGCTTTTTGACGTACCTACAAAATGAGCAGAAAGAAGCTATTATCAAGGAGGAAACTGATATTCATACTTACTCAAGTAGAGATGTAGAAATGATCTTAAATGATGATGATATTTCAAAAGATAATGCTCCTGGAACTCCAACAGACCATCAACAAGTTCTATCACCTGCATATGATGCAACCTCTTTAACTAATGGGAATGTTTTATCATCTGGAAAATCATGGAAACCTACAACAGCATTTTCTAAGCGAACTAATAGGCTTGAGGTGAAGTTCAGCATCAACAAAATGCCTAATCTGGAGATTACAAAACAAGAACCTAGTCATGACAATGATGAGGATGACATAGTCAGAAAGGTTTGTCCACGACCAAGGTGTTCATTGGTGGTTCATGGATCAGGGCCCAGACCAGATTGTAGATTCATGTATGATAGGACTGAAGATAGGTTTAATGCACTAGAAAACCAAATTAAGAAACATACAAGAGTATATGTGGCTTCTGGGCTCTATGAAGAACCAATGGACCCAACAATTGCTTCACAGAGAAGCATTTTCACTGTTGGCATGATTTGTTGTGATGTGGAAGGGCGTCTAAATGAGAAGTCTGTCATGCTGCAGAGCAGTGCTGAGAACTCTGGAGGGCAACGCGTTCGCCTGGAATTACAACAACTAAGCCACTTTTCAGTTTTCCCAGGCCAGGTAGTTGGTATTGAAGGGCATAATCCTAGTGGACACTGTTTAGTGGCATCTAAAATGGTAGATTCTATAATTTGCTCTCCTGGTGAGAGCGAAAATTTGAATCCAGCAAAGAAGCTAGCCTTTGATAAGGAAAATCATCCGACTGATCTGCCTTGCAAGCTGAGGGAGTTATCAATGGTTATTGCTGCTGGCCCTTTTACTACTTCAGACAATCTATCGTTTGAACCTCTTGCAGAACTACTGGCATATGCAAAGAAAAGATCACCACAATTGATTATATTGATGGGACCATTTATTGACACTGAACACCCTGACATTAAAAAGGGAACCACAGAAAGGAGCTATGATGAAATATTTCGTATTGAAATCCTCAGAAGGTTGGAAGATTACATAGAGTGTATGGGTTCTGCTGTTCGAATTCTTCTTGTACCTTCTATTCGAGATGCTAACCATGATTTTGTTTTCCCCCAGCCCGCATTTGATATCAAGCTTCCTGATCTCAAGCCTCAGATAGCCAGTCTCACTAACCCTGGAATTTTTGAGGCAAATGAGGTCAAGGTTGGTTGCTGCACTATGGACATCCTCAAGCAGCTCAGTGGGGAGGAAATATCACGTTTTTCAGCAGACGTGAAACCTGGTGATCGCATGAGTAGACTTGTAAACCATATTCTTAAGCAACAAAGCTTTTATCCTCTTTATCCACCAGCAGAGAGTGTTCCTTTGGACTATTCTCTTGCTCCAGAAGCTCTTCAAGTCCCGTGGGTGCCCGATGTTCTCATTTTACCTTCAGACATCAAGTACTTCGTCAAGGTGCTTAATGATGAAAGTGAAGGGAACCACATGAAGTGCATTTCTGTCAATCCTGGAAGACTAACCAAGGGAGAAGGAGGGGGTACTTTTGCCGAGCTCGACTTCTACGAAAGTGCTGACACAAGCAATGCTTCAATTGTTGGCATATAA 1857 0.412 MAIEEEIKAEFGRSGFDLEDEEEILNKCLPFCINYSLNPSDLVSSWEVYYLNRQLNGSTVQSAEIDGFLTYLQNEQKEAIIKEETDIHTYSSRDVEMILNDDDISKDNAPGTPTDHQQVLSPAYDATSLTNGNVLSSGKSWKPTTAFSKRTNRLEVKFSINKMPNLEITKQEPSHDNDEDDIVRKVCPRPRCSLVVHGSGPRPDCRFMYDRTEDRFNALENQIKKHTRVYVASGLYEEPMDPTIASQRSIFTVGMICCDVEGRLNEKSVMLQSSAENSGGQRVRLELQQLSHFSVFPGQVVGIEGHNPSGHCLVASKMVDSIICSPGESENLNPAKKLAFDKENHPTDLPCKLRELSMVIAAGPFTTSDNLSFEPLAELLAYAKKRSPQLIILMGPFIDTEHPDIKKGTTERSYDEIFRIEILRRLEDYIECMGSAVRILLVPSIRDANHDFVFPQPAFDIKLPDLKPQIASLTNPGIFEANEVKVGCCTMDILKQLSGEEISRFSADVKPGDRMSRLVNHILKQQSFYPLYPPAESVPLDYSLAPEALQVPWVPDVLILPSDIKYFVKVLNDESEGNHMKCISVNPGRLTKGEGGGTFAELDFYESADTSNASIVGI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00845 618 FunFam DNA polymerase alpha subunit B 339 504 - -
Accr8g00845 618 Pfam DNA polymerase alpha subunit B N-terminal 23 228 IPR013627 -
Accr8g00845 618 PIRSF DNA_pol_alpha_2 1 615 IPR016722 -
Accr8g00845 618 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 4 607 IPR016722 -
Accr8g00845 618 FunFam DNA polymerase alpha subunit B 2 76 - -
Accr8g00845 618 Gene3D - 508 615 - -
Accr8g00845 618 Gene3D - 341 507 - -
Accr8g00845 618 Pfam DNA polymerase alpha/epsilon subunit B 359 569 IPR007185 GO:0003677|GO:0006260
Accr8g00845 618 Gene3D - 2 78 IPR043034 -
Accr8g00845 618 Coils Coil 209 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00845 1 618 Core DNA Replication Machinery Family AT1G67630 56.522 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00845 K02321 - qsa:O6P43_030564 918.302