Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00840 ATGGCTCTTGCTGTTGATACTCCATTGGGTATTCTCAATGCTGCTTTCTTCATAGCTTTATTGTTATGGATTTTGATTGATAGTCTGAGAGAAAGCAAGCGTAGCGATGTTGTGTTTTTGAAACACGTACCAAAACGATTCGCCGTTTTCTCTGCAATCACGCTTTCCATTCATGCGGTTCTTTCGGTTTTGAACTTGGCTTTTGCGTTTCATGAGTATTGGAGCGAGAAAATCGTGTCGTATTGTTCTTTTTCTTTGGCTTTCACTTGGGTTTTAGCGACTTTGGTTTCGGTATATTCCGTGAAGAGAATACGCCGCCACAGCAAAACGTGGCCTCTCATTTTGATTCTCTGGTGGTTCTTCACCACAGTATTGGATTCAATCTTCGTTTCTGTGAAACTCGTCAAGAATTTCAAATCCTTGGATTTGTCTTTCTTTCTGTCAGAGGAAAACTTGGTGGATTTCGTTTCCTTTCCTCTGTTGTTACTTCTCTGGTTGAATGCTCTGCCTTCTGTATGGACGAGAAAATCCAGTGAATCTGAACAAGTGTTGCTTCAAAAGGAGGAAGACGAAGATGAAGAAGAAGATAAGGAAGCATTTATAAATGCTGGAATATGGAGCAAGCTCACGTTTCAATGGCTAAATCCTATTTTCAGGAGAGGTCAGATGCAGAAACTTGAACTTCCTCATATACCTTCAGTTCCTCAATCTGAAAGTGCAGAATACGCTTCTTCCATGCTCGAAGAATCACTGCGAAAACGAAAACTCGAAAAGGGTTCACTGTCAAAAGCTATGGCCTGTTTTATCCGGAAATCCTTGGCCTTGAATGCAGTATTTGCAGGTATTAACACAATGGCCTCTTACATGGGTCCCTTGTTAATCACAAACTTTGTGAATTTGTTGTCTGGAAATAATAACGATTCAAACATCCACTACGGGCTAATTCTTGCTTTCATCTTCTTCCTGGCGAAGACTGTGGAATCACTAACTCAAAGACAATGGTACTTTGGAGCTCAACGAATAGGAATCCGAGTCCGTGCAGCACTCACGGGTCTAATATATATCAAATCACTATCAATCAAGTGTGGGGGACCAACACAAGGCAAAATCACAAATTTCATAAACGTGGATGTTGAAAGGATCGGAGATTTCTGCTGGTACATTCATGGAGTATGGTTGCTTCCGGTTCAGGTTGTTTTGGCCTTGGTTATCTTGTACATGAATTTAGGATTCACACCCTCCATTGCTGCATTTGCTGTAACTGTTTTGGTCATGGTTTGCAACACTCCCATGGCTAATATGCAGGAAAGTCTTCACTCCAAGATTATGGAAGCTAAGGATTCGAGGATTAAGGCTACTTCAGAGATACTAAAGAACGTAAGGATTCTGAAATTGCATTCTTGGGAATCCACATTTCTGAAGAAGCTGTATCTGCTCAGGGAAACTGAGAAGAGCTGGCTTAAGAAGTATCTGTATACTTCCTCAGCAGTGACATTTCTGTTTTGGACCGCACCAACTCTGGTTTCTGTGGTCACTTTTGGTGTCTGTATAATGGTGAAAACTAAATTAACTGCAGCCACTGTGCTCTCAGCTTTAGCAACTTTTCGTATCTTGCAAGAACCAATCTATAACTTACCTGAGCTTGTGTCCATGATAGCTCAAACAAAAGTATCCATTGATAGAATCCAAGAGTTCATTAAAGAAGATGATCAAATGCAGTTCATGACTAAGCCTACATTGAAACTTTCTGATGTTGCCATTGAGATTAAAGCAGGTGAATACTCATGGGAAGCTGATGATCTATACAATAAGAAACCAACTATTCAAATTACAGAGAAGTTGAAGATAGAGAAAGGTCAAAAGGTTGCAATATGTGGGTCTGTGGGGTCTGGCAAATCAAGCCTGCTATGCTGTATGCTTGGTGAGATTCCGAAGAGTTCAGGGGTAGGAATTGAAGTATATGGAAATAAAAGTTATGTGCCCCAAAGTCCTTGGATTCAATCAGGGTCTGTAAGAGAAAATATACTGTTTGGCAGGAAAATGAACATGGAATTGTATGAGAAAGTCCTGGAATGTTGTGCATTGCATCAGGATATCAAACAGTGGGAAGATGGAGATTTGACCATGGTGGGGGAGAGGGGTATAAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTGGCACGGGCTGTTTACAATGATTCAGATATTTATTTCCTAGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGGACTCATTTATTTAAGAAATGTCTCTTAGAACTTCTATCTGAGAAAACTGTTGTTTATGCTACCCATCAACTGGAATTTTTGGAAGCTGCTGATCTTGTCTTGGTAATGAAAGATGGGAAAATAGTTGGGTCAGGAAAGTATAAAGATCTGATAGCTTGTCACAGTTGTGAACTTGTTGATCAAATGGCTGCTTATAAGGAAACAATAAAGCAAATCAGACCATGCTGCGAGGATAATTCCTTATCCAAGAACAGTATACCATTTCAAACGCCCCAAATTGAATTAGTCGAAACAAACCTTGCCATGTACCTTGAAGAAAACAAGAATTTGGATAGAAACAAAGAAGAGAAAGCAGAGACGGGTCGAGTTAATTGGAGTGTTTACTCAACTTTTGTCACCTTTGCTTATAAAGGTGCATTAGTTCCCGTTATTATCCTATGCCAAATTGTCTTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTGCAGAACAAAGAAACAATGTTAGTAAAGGGGCGCTTATGGGGACCTTTGTTTTGCTATCTGGTGGCAGTTCCATCTTTATATTGGGAAGGGCTTTGTTCATGGCAAAAATTGCTGTAGAGACAGCTCATCGTCTTTATCATGAAATGATTACATCAGTTTTCAGAGCTCCTATTTCTTTTTTTGATACTACTCCTTCAAGCAGGATTTTAAATAGGTGTTCCATAGATCAAAGTACAGTAGATACAGATATACCATACAGACTAGCTGGACTTGTATTTGCACTCATCCAGTTATTGAGTATCATCATTCTAATGTCCCAAGTTGCTTGGCAAGTCATTATTTTCTTCATTGTGGTGCTTTCAATCTGCATCTGGTATCAGGCTTATTACATTACTACAGCTAGAGAATTGGCCAGGATGGTAGGGATCAGGAAGGCTCCAATCTTGCATCACTTTTCAGAATCAATTGCTGGGGTGGCCACAATTCGTTGTTTCAATCAACAGCAAAGATTTTATACGAAAGTTATGGCTCTAGCTGATGGTTATTCTCGTGTGGTGTTTCATAATTACGCCACCATGGAATGGTTGTCTGTTAGGATAAACTTTCTCTTTAATCTAGTCTTCTTTTTCGTGCTTATCATCTTGGTTACACTGCCAAGGCCTGCCATTGATCCTAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTAAGTGTTCTTCAGGCTTGGGTAATATGGAACCTCTGCAATGTGGAGAACAAAATGATATCAGTAGAGAGGATACTACAATTCACAAAGATACCAAGTGAAGCTCCATTGATAATCCAAGATTGTAGGCCCCAACTAGAGTGGCCTAGGGAGGGAAAAATTGAGCTTCACAATCTTCACATACAGTATGATCCTACAGCTCCTATGGTTCTTAAAGGTGTCACTTGTACCTTTCCGGGATGCGAGAAGATTGGAGTTGTAGGGAGGACAGGAAGTGGAAAATCCACCTTAGTGCAAGCTCTCTTCCGAGTGGTGGAACCTTCAGCAGGACGTGTACTTATCGACAGCGTAGATATTTGCAAGATTGGCCTCAAGGACTTAAGATCTAGGCTTGGTATTATCCCTCAAGATCCTACCTTGTTTCAAGGTACTGTAAGGAGCAACTTGGATCCTTTAGAACAACACTCAGATCAAGAACTTTGGGAGGTACTCGGTAAGTGCCATCTTGGTGATATAGTTAGGACGGATCCAAGGCTTCTAGAGGCGTCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGTCTTGCCAGGCTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCTACTGCTTCGATTGATACAGCGACTGATAATTTAATTCAGAAGACTATTAGGGAAGAGACAAGTGAATGCACAGTCATTACAGTGGCTCATAGGATTCCTACAGTTATTGATAATGATCGTGTATTGGTCCTCGATGAAGGGAGGATTGCTGAGTTTGATCAACCCGCTAAATTGCTAGAGAACAATTCATCATCATTCTCAAAGCTAGTATCAGAATTTTTGAGGAGATCAACTGAAAGTGATTGCCAAAAGGACGCAATGTGTAGATTCTGA 4386 0.4058 MALAVDTPLGILNAAFFIALLLWILIDSLRESKRSDVVFLKHVPKRFAVFSAITLSIHAVLSVLNLAFAFHEYWSEKIVSYCSFSLAFTWVLATLVSVYSVKRIRRHSKTWPLILILWWFFTTVLDSIFVSVKLVKNFKSLDLSFFLSEENLVDFVSFPLLLLLWLNALPSVWTRKSSESEQVLLQKEEDEDEEEDKEAFINAGIWSKLTFQWLNPIFRRGQMQKLELPHIPSVPQSESAEYASSMLEESLRKRKLEKGSLSKAMACFIRKSLALNAVFAGINTMASYMGPLLITNFVNLLSGNNNDSNIHYGLILAFIFFLAKTVESLTQRQWYFGAQRIGIRVRAALTGLIYIKSLSIKCGGPTQGKITNFINVDVERIGDFCWYIHGVWLLPVQVVLALVILYMNLGFTPSIAAFAVTVLVMVCNTPMANMQESLHSKIMEAKDSRIKATSEILKNVRILKLHSWESTFLKKLYLLRETEKSWLKKYLYTSSAVTFLFWTAPTLVSVVTFGVCIMVKTKLTAATVLSALATFRILQEPIYNLPELVSMIAQTKVSIDRIQEFIKEDDQMQFMTKPTLKLSDVAIEIKAGEYSWEADDLYNKKPTIQITEKLKIEKGQKVAICGSVGSGKSSLLCCMLGEIPKSSGVGIEVYGNKSYVPQSPWIQSGSVRENILFGRKMNMELYEKVLECCALHQDIKQWEDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLLELLSEKTVVYATHQLEFLEAADLVLVMKDGKIVGSGKYKDLIACHSCELVDQMAAYKETIKQIRPCCEDNSLSKNSIPFQTPQIELVETNLAMYLEENKNLDRNKEEKAETGRVNWSVYSTFVTFAYKGALVPVIILCQIVFQGMQMGSNYWIAWAAEQRNNVSKGALMGTFVLLSGGSSIFILGRALFMAKIAVETAHRLYHEMITSVFRAPISFFDTTPSSRILNRCSIDQSTVDTDIPYRLAGLVFALIQLLSIIILMSQVAWQVIIFFIVVLSICIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQQQRFYTKVMALADGYSRVVFHNYATMEWLSVRINFLFNLVFFFVLIILVTLPRPAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLIIQDCRPQLEWPREGKIELHNLHIQYDPTAPMVLKGVTCTFPGCEKIGVVGRTGSGKSTLVQALFRVVEPSAGRVLIDSVDICKIGLKDLRSRLGIIPQDPTLFQGTVRSNLDPLEQHSDQELWEVLGKCHLGDIVRTDPRLLEASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDRVLVLDEGRIAEFDQPAKLLENNSSSFSKLVSEFLRRSTESDCQKDAMCRF 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00840 1461 SUPERFAMILY ABC transporter transmembrane region 270 567 IPR036640 GO:0005524|GO:0016020
Accr8g00840 1461 Pfam ABC transporter 1225 1373 IPR003439 GO:0005524
Accr8g00840 1461 CDD ABCC_MRP_domain2 1206 1426 - -
Accr8g00840 1461 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 274 554 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00840 1461 FunFam ABC transporter C family member 5 856 1189 - -
Accr8g00840 1461 FunFam Multidrug resistance-associated protein 4 573 832 - -
Accr8g00840 1461 CDD ABC_6TM_ABCC_D1 275 562 IPR044746 GO:0140359
Accr8g00840 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 806 IPR027417 -
Accr8g00840 1461 CDD ABC_6TM_ABCC_D2 893 1183 IPR044726 GO:0140359
Accr8g00840 1461 Coils Coil 845 872 - -
Accr8g00840 1461 FunFam ABC transporter C family member 10 257 570 - -
Accr8g00840 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1200 1434 IPR027417 -
Accr8g00840 1461 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 895 1171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00840 1461 Pfam ABC transporter 613 744 IPR003439 GO:0005524
Accr8g00840 1461 SMART AAA_5 618 792 IPR003593 GO:0016887
Accr8g00840 1461 SMART AAA_5 1234 1427 IPR003593 GO:0016887
Accr8g00840 1461 ProSitePatterns ABC transporters family signature. 717 731 IPR017871 GO:0005524|GO:0016887
Accr8g00840 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1208 1442 IPR003439 GO:0005524
Accr8g00840 1461 CDD ABCC_MRP_domain1 587 792 - -
Accr8g00840 1461 FunFam ABC transporter C family member 3 1191 1443 - -
Accr8g00840 1461 Pfam ABC transporter transmembrane region 275 541 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00840 1461 Pfam ABC transporter transmembrane region 904 1134 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00840 1461 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1446 - -
Accr8g00840 1461 Gene3D ABC transporter type 1, transmembrane domain 254 567 IPR036640 GO:0005524|GO:0016020
Accr8g00840 1461 Gene3D ABC transporter type 1, transmembrane domain 856 1189 IPR036640 GO:0005524|GO:0016020
Accr8g00840 1461 Gene3D - 568 828 IPR027417 -
Accr8g00840 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 580 815 IPR003439 GO:0005524
Accr8g00840 1461 SUPERFAMILY ABC transporter transmembrane region 895 1190 IPR036640 GO:0005524|GO:0016020
Accr8g00840 1461 Gene3D - 1191 1444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00840 Accr-Chr8 18758628 18764157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00840 1193 1441 Calmodulin-binding Proteins AT2G36910 30.534 1.41e-30 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00840 - - gmx:100809063 2059.26