Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00838 ATGTATTTATCTGAGAAACCTCGTCCTATCGATTTCTACAAAGAAGAAGGAAGTCGAGATATGATAATCGAAGTTGTCTCAAATGGAGAACTTCCTCCACCTCACCAACAAGCGCCACAACATCAAATGATTCTCGGCGAGAGTAGTGGTGAGGACCATGAAGTTGAAATTAAGGCTCCCAAGAAGCGTGCTGAGACTTGGGTTCAAGACGAGACACGGAGTTTGATAGCCCTTCGCCGTGAGATGGATGGGCTTTTCAATACATCCAAGTCCAACAAGCATTTGTGGGAACAAATATCGGCGAAGATGAGAGAGAAGGGGTTTGATCGCTCGCCCACTATGTGCACGGACAAATGGAGGAATCTGTTGAAAGAATTTAAGAAGGCTAAGCACCAGGATAGGGGAAGTGGGTCTGCTAAGATGTCTTATTATAAAGAAATTGAGGATATTTTGAGGGAGAGGAATAAGAGTATGCAGTACAAGAGCCCTACACCACCTAAGATTGATTCTTATATGCAGTTTGCAGACAAAGGTATTGACGATACCAGCATCTCTTTTGGCCCAGTTGAAGCTGGCAGACCAACACTCAATCTTGAGAGGCGTTTGGATCATGATGGACATCCTCTTGCCATTGCTGCAGCTGATGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGCGGAAGGTCAGTCATGTTGTGGGAGGGTCATATCAGTCAAATGGGGTGATTATACGAGAAGAATAGGTATAGATGGCACTTCTGATGCCATCAAGGAGGCAATAAGGGCTGCTTTTAGGTTGAGAACTAGACGTGCGTTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTCTTGACCGTGACATGCCTTTAGGAAGTTACACTCTTCACCTAGACGAAGGAATGGCCATTAAAGTATACCTTTATGATGAATCTGACCATATTCCTGTTACTGAGGATAAGATCTTTTATGCTGAAGATGATTACCGTGATTTTCTGGCACGCCGAGGCTGGACATGTCTGAGGGAAGTCGACGGCTACAGAAACATTGAGAATATGGATGATCTTCGGCCTGGTTCCATATACCGCGGTGTTTATAACAGGGAACTATTTGTGGAGAACCATCGAAGAGAACAGAGAAGGTGA 1170 0.4479 MYLSEKPRPIDFYKEEGSRDMIIEVVSNGELPPPHQQAPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEDILRERNKSMQYKSPTPPKIDSYMQFADKGIDDTSISFGPVEAGRPTLNLERRLDHDGHPLAIAAADAVAASGVPPWNWRETPGNGAEGQSCCGRVISVKWGDYTRRIGIDGTSDAIKEAIRAAFRLRTRRAFWLEDEDQIIRSLDRDMPLGSYTLHLDEGMAIKVYLYDESDHIPVTEDKIFYAEDDYRDFLARRGWTCLREVDGYRNIENMDDLRPGSIYRGVYNRELFVENHRREQRR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00838 389 Gene3D - 67 129 - -
Accr8g00838 389 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Accr8g00838 389 SMART sant 63 125 IPR001005 -
Accr8g00838 389 Pfam Myb/SANT-like DNA-binding domain 66 149 IPR044822 -
Accr8g00838 389 CDD GT1 65 130 - -
Accr8g00838 389 PANTHER FI21293P1 42 371 - -
Accr8g00838 389 FunFam trihelix transcription factor GT-1 67 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00838 Accr-Chr8 18609118 18617402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00838 1 373 Trihelix Transcription Factor Family AT3G25990 68.814 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr8g00838 Myb_DNA-bind_4 7.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00838 - - qsa:O6P43_023896 657.907