Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00827 ATGCAGTGCTGTATCATCGCAAGGCTAAAAACCCAACCTCTATGGTTTGGGTTGCTCTTCGTTTTGGGTTTATTCTCCCTTCTGAAATTTTTCATAGCTTTTCTCAGATGGGTTTATGTCAATTTTCTCAGAGCCCCCAAGAATCTTAAGAAATACGGATCTTGGGCAGTCATTACTGGACCCACAGATGGTATTGGCAAAGGCTATGCTTTTCAATTGGCTCGTGTAGGGCTTAATCTGGTGTTGGTCGGTCGGAATCCGGATAAGCTAAAGGATGTTTCCGATTTGATTCTAGCCAAGTACGGGAAAAGCCAGATTAAGACGGTCGTCGTTGATTTTGCAGGAGATGTTTCGGAGGGTATGGTCAAGATTCGTGAAGCTATTGAAGGGTTAGATGTTGGTGTCTTGATTAATAACGTGGGAATCTCATATCCTTATGCGAGATATTTCCATGAAGTGGATGAGGAGCTACTGAAGAATCTGATTAAAGTGAATGTAGAAGGAACTACCAAGGTTACGCATATTGTTCTTCCTGGTATGCTTCAGAGAAAGAAAGGAGCAATCGTAAATATTGGTTCTGGAGCAGCAATTGTGATTCCTTCAGATCCGCTGTATGCTGTGTATGCTGCAACAAAAGCGTACATAGATCAATTCTCGAGATGCCTCTATGTTGAATACAAGAAAAGCGGGATCGATGTCCAGTGTCAGGTCCCATTATATGTGGCAACAAAGATGGCATCAATAAAGAGATCTTCATTTTTTGTGCCATCAACTGATGGATATGCACGAGCCGGCATGCGTTGGATCGGGTATGAGCCACGATGCACCCCTTACTGGCCACATTCCATTCTGTGGGTATTGGCTTACTCTTTGCCTGAGTCTCTGGTCGATGCTTGGCGTCTCTGGTTCTGCCTTGGCATTCGAAAGAGGGGGCAACTCAAGGATACAAAGAAGAAGGAATAA 963 0.4393 MQCCIIARLKTQPLWFGLLFVLGLFSLLKFFIAFLRWVYVNFLRAPKNLKKYGSWAVITGPTDGIGKGYAFQLARVGLNLVLVGRNPDKLKDVSDLILAKYGKSQIKTVVVDFAGDVSEGMVKIREAIEGLDVGVLINNVGISYPYARYFHEVDEELLKNLIKVNVEGTTKVTHIVLPGMLQRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIKRSSFFVPSTDGYARAGMRWIGYEPRCTPYWPHSILWVLAYSLPESLVDAWRLWFCLGIRKRGQLKDTKKKE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00827 320 FunFam very-long-chain 3-oxoacyl-CoA reductase 1 49 277 - -
Accr8g00827 320 PIRSF 11-beta-HSD1 5 314 - -
Accr8g00827 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 303 IPR036291 -
Accr8g00827 320 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Accr8g00827 320 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Accr8g00827 320 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Accr8g00827 320 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Accr8g00827 320 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Accr8g00827 320 Gene3D - 49 265 - -
Accr8g00827 320 PANTHER RH59310P 14 319 - -
Accr8g00827 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Accr8g00827 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Accr8g00827 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Accr8g00827 320 CDD 17beta-HSD1_like_SDR_c 53 295 - -
Accr8g00827 320 Pfam short chain dehydrogenase 55 247 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00827 Accr-Chr8 16101379 16103196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00827 1 320 Lipid Metabolism Gene Families AT1G67730 64.062 1.56e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00827 K10251 - jre:108990665 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00612 5 28519766 28525864 Accr8g00827 8 16101379 16103196 CCT
Accr8g00827 8 16101379 16103196 Accr8g00827 8 16101379 16103196 ECH