Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00813 ATGGGAAAAAAAGGTGGGTTTCTTCGTTATGCAGATAGGGTAGACAAGTTACTATTATTGTTTGGGACATTGGGTTGCATTGGAGATGGCCTTCAAACTTCTATCACAATGCTTGTTCTTGGCAGTTTGATTGATGACTATGCCAATCATACTTCTGATTCTGAGAATGATGCCTTCAAGCATTCTGTAGACAAGTATGCTCTCAGGCTGCTTTATATTGCCATTGTGGTAGGTTTATCTGCATTTATTGAAGGACTATGTTGGACAAGAACCGCAGAAAGACAAACATCTCGAATGAAAACTGCATATCTTAAATCAATTCTAAGGCAAGAAGTCGGTTTTTTCGATAGCCAGTCCGGCTCTTCCACAACCTTCAAAGTGATTTCCACCATATCTTCTGATGCTCAAACCATTCAAGACACCTTGGCTGAAAAGATACCAACATGTTTGGTTCACCTTTCAGCAGTTTTCTCAAGCTTCATAGTAGCTGCAATTCTTTCATGGAGATTAGCACTATCTGCTTTTCCATTTTCAGTTATGATGATAATGCCAGCAATCATATTTGGGAAGAAACTAAAGGAGCTGGGAGGTCAGATGAAGGATGCTTATGGTGTTGCTGGTGGCATAGCAGAGCAAGCAATCTCATCAATTAGAACAGTATATTCATATGTTGGTGAGAAACAAACACTAGAGAGGTTTGCCTCGGCTCTTGAAACAAGCATGAAGGTTGGTATAAAGCTTGGTTCAACCAAAGGTGTGGTGATTGGAAGCTTTGGCTTGATCTATGCAACATGGGCGTTTCAAACATGGGTTGGAAGCATTTTGGTCTCTCAAAGAGGAGAAAGTGGTGGAAAAGTATTTGTTGCAGAAATATGTATCATCTGGGGAGGATTGTCAATGATGAGTGCACTTCCACGTCTTGCTTCTTTAGCAGAGGCAACAGTTGCAGCTACTCGAATTTACGAGATGATCGATCGAGTGCCAGCTATATACTCTGATAGAGAAAGAGGGAAGATTTTGAAGGATGTGAGGGGAGAGATCAGTTTCAAAGATGTTGACTTTAGCTATCCATCAAGGCCAGATACTCCAATTCTAAGAGGACTCAATCTGAAATTTGGAGCCGGCAAAACAGTGGGTCTTGTTGGAGGGAGTGGTTCTGGGAAATCTACAATAATCTCTCTAATTGAAAGGTTTTATGATCCTGTAAGTGGAAACATATTGCTTGATGGACATGATATAAAGAAATTTCATGTCAAGTGGTTAAGGTCCCAAATGGGACTGGTAAGCCAAGAGCCAATTCTCTTTGCAACATCTATTAAAGATAACATCCTACTTGGGAATGAACGAGCTTCAATGGAAGAAGTTGAAAATGCAGCAAGGGCTGCCAATGCACATGATTTCATTGTCAAATTTGTCCATGGATATGAAACTCAAGTGGGGCAACTAGGAGCCCAATTGTCTGGAGGGCAAAGGCAAAGGATTGCCATTGCAAGGGCTCTAATAAGAAACCCCAGAATCCTACTACTTGATGAAGCTACCAGTGCTCTAGATTCACAGTCTGAAAAATTAATACAAAAAGCATTGGATTTAGCTTCCCAAGGAAGAACCACAATCATTGTAGCCCATCGCCTTTCAACGATTCGTAAGGCTGACTTAATTGTAGTTCTTCAATCAGGGAAAGTCATTGAATCAGGTTCCCATGATGAGTTAATCCAAATGAATAATGGACAAGCTGGAACATACAACAAAATGCTTCAATTGCAACAATCAACGCTTGAAAACAAAGAGGAACCCACTTATTACGACACAAACACAAGTCCACTAAATGTAGAGGTTCCAACAACACACTATTCAAGTTGGAAAAGTAGCCCAGCTATGCCATTTAGCCCGGTATATTCTTTTAGCATTGCAGATTCTCCTCTTGTTCCCTCTTGGAATGAAGATGATCACTACAACAAGAACAACATCAAGAAATCTTCTGATTCATATCAAAATTTCTCACAATGGCGTTTGATACAGATGAATGCACCTGAATGGAAGCAAGCTTTGCTTGGGTGTTTAGGAGCCATAGGGTCTGGAATATGCCAGCCAATATACTCTTATTGCTTGGGAATTGTTGCATCTGTTTACTTCATAAAAGACAAACCTCGAATCAAATCCGAAATCAGGTTTTACTCGATCATCTTTTGCACGCTAGCCACTGTGAACATCATTTCAAGTCTCATTCAGCAGTACAATTTCTCTGTCATGGGAGAAAGGTTGTTGAAAAGAGTAAGAGAAAACTTGCTGGCCAAAGTTTTAACCTTTGAAATTGGATGGTTTGATCATGAAGATAACACTAGCGCAGCAATTTGCACACGGCTAGCGAATGAAGCTAACATGGTTCGGTCCCTTGTTGCCGAAAGAATGTCATTGTTGGTTCAAGTTTTCTTTACGGCATCTCTGGCTTTTATACTTGGCTTAGTTGTTTCATGGAGGGTGGCTATTGTGATGATTGCTATGCAGCCTTTGATCATTACTTGTTTCTATTCAAAAAGTGTTCTGAGGAAAAGTATGTCTGTGAAAGCTCAAAAGGCTCAAAAAGAAGGAAGTCAATTAGCAATGGAAGCTACCATCAACCATAGAACTGTTGCAGCATTCTCATCAGAGAGAAGGATACTGAATCTATTTAAGATTGCCATGAAAGAACCTCGAAAGGAAAGCATTAAGCAATCATGGATTTCAGGTTCCATCTTGTCAATCTCTCAGTTTTTGACAACTGCATCTATAACTATTACTTTTTGGTATGGAGGTAGGCTTTTGAATCAAGGATTAGTAGAATCAAAGAACCTTTTGCAGGTTTTTCTGATATTGATGGGAACTGGAAGACAAATTGCAGAGACAGCAAGTATGACTTCTGACCTAGCCAAAAGTGGGAGAGCTATTGGTTCAATTTTTGCCATCTTGGACAGGAAAAGTCAGATTGAACCTGAAGAAGATGATCATCACACACATAAGAAGTCTAAAAAGCCAATTAAGGGCAACATAAAGTTACAGAATGTCTTTTTTGCTTACCCAACAAGGCCCGACCAAATGATACTAAAGGGTCTAAGTCTTGAGATTGAATCTGGGAAAACAATAGCACTAGTGGGACAAAGTGGCTCAGGGAAATCTACCATCATTGGGTTAATTGAAAGGTTTTATGACCCTGTGAAGGGATCGATATCTATAGATAACTGTGACATTAAGGAATTCAGTCTGAGAAAGTTGAGATCAAAGATTGCCTTGGTGAGTCAGGAGCCAACCCTATTTGCAGGAACCATTCGCGACAACATCGTTTATGGGACAAAGGAAGCATCAGAGGAAGAAATAAGAAGGGCAGCACATCTTGCAAATGCTCATGAGTTCATAAGTTCTATGAAAGATGGGTATAATACAAATTGTGGAGAAAGAGGAGTGCAACTATCAGGAGGCCAAAAGCAAAGGATAGCAATAGCAAGAGCAATACTGAAGAACCCATCAATCTTGCTTTTAGATGAAGCAACCAGTGCCCTTGATAATGTATCAGAGAGTCTGGTGCAGGAGGCACTTGAGAAGATGATGGTTAAAAGAACATGTGTAGTTATAGCTCATCGACTGTCCACAATACAAAGTGTAGATTCTATAGCTGTGATTAAGAATGGCGAGTTGGAAGAACTAGGATCACACTCTGAGTTATTGGCCAGAGGACGAAATGGGGCATACTATTCTATGGTTAAGTTACAGAAGAGTCACTCAACATAA 3762 0.4014 MGKKGGFLRYADRVDKLLLLFGTLGCIGDGLQTSITMLVLGSLIDDYANHTSDSENDAFKHSVDKYALRLLYIAIVVGLSAFIEGLCWTRTAERQTSRMKTAYLKSILRQEVGFFDSQSGSSTTFKVISTISSDAQTIQDTLAEKIPTCLVHLSAVFSSFIVAAILSWRLALSAFPFSVMMIMPAIIFGKKLKELGGQMKDAYGVAGGIAEQAISSIRTVYSYVGEKQTLERFASALETSMKVGIKLGSTKGVVIGSFGLIYATWAFQTWVGSILVSQRGESGGKVFVAEICIIWGGLSMMSALPRLASLAEATVAATRIYEMIDRVPAIYSDRERGKILKDVRGEISFKDVDFSYPSRPDTPILRGLNLKFGAGKTVGLVGGSGSGKSTIISLIERFYDPVSGNILLDGHDIKKFHVKWLRSQMGLVSQEPILFATSIKDNILLGNERASMEEVENAARAANAHDFIVKFVHGYETQVGQLGAQLSGGQRQRIAIARALIRNPRILLLDEATSALDSQSEKLIQKALDLASQGRTTIIVAHRLSTIRKADLIVVLQSGKVIESGSHDELIQMNNGQAGTYNKMLQLQQSTLENKEEPTYYDTNTSPLNVEVPTTHYSSWKSSPAMPFSPVYSFSIADSPLVPSWNEDDHYNKNNIKKSSDSYQNFSQWRLIQMNAPEWKQALLGCLGAIGSGICQPIYSYCLGIVASVYFIKDKPRIKSEIRFYSIIFCTLATVNIISSLIQQYNFSVMGERLLKRVRENLLAKVLTFEIGWFDHEDNTSAAICTRLANEANMVRSLVAERMSLLVQVFFTASLAFILGLVVSWRVAIVMIAMQPLIITCFYSKSVLRKSMSVKAQKAQKEGSQLAMEATINHRTVAAFSSERRILNLFKIAMKEPRKESIKQSWISGSILSISQFLTTASITITFWYGGRLLNQGLVESKNLLQVFLILMGTGRQIAETASMTSDLAKSGRAIGSIFAILDRKSQIEPEEDDHHTHKKSKKPIKGNIKLQNVFFAYPTRPDQMILKGLSLEIESGKTIALVGQSGSGKSTIIGLIERFYDPVKGSISIDNCDIKEFSLRKLRSKIALVSQEPTLFAGTIRDNIVYGTKEASEEEIRRAAHLANAHEFISSMKDGYNTNCGERGVQLSGGQKQRIAIARAILKNPSILLLDEATSALDNVSESLVQEALEKMMVKRTCVVIAHRLSTIQSVDSIAVIKNGELEELGSHSELLARGRNGAYYSMVKLQKSHST 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00813 1253 CDD ABC_6TM_Pgp_ABCB1_D2_like 672 988 - -
Accr8g00813 1253 FunFam ABC transporter B family member 4 337 596 - -
Accr8g00813 1253 PANTHER ABC TRANSPORTER B FAMILY 8 740 IPR039421 -
Accr8g00813 1253 Pfam ABC transporter 1027 1176 IPR003439 GO:0005524
Accr8g00813 1253 Pfam ABC transporter 365 514 IPR003439 GO:0005524
Accr8g00813 1253 SUPERFAMILY ABC transporter transmembrane region 7 328 IPR036640 GO:0005524|GO:0016020
Accr8g00813 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 587 IPR027417 -
Accr8g00813 1253 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1009 1245 IPR003439 GO:0005524
Accr8g00813 1253 SMART AAA_5 374 560 IPR003593 GO:0016887
Accr8g00813 1253 SMART AAA_5 1036 1222 IPR003593 GO:0016887
Accr8g00813 1253 Gene3D - 994 1252 IPR027417 -
Accr8g00813 1253 ProSitePatterns ABC transporters family signature. 486 500 IPR017871 GO:0005524|GO:0016887
Accr8g00813 1253 Gene3D ABC transporter type 1, transmembrane domain 651 993 IPR036640 GO:0005524|GO:0016020
Accr8g00813 1253 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 347 583 IPR003439 GO:0005524
Accr8g00813 1253 CDD ABC_MTABC3_MDL1_MDL2 347 588 - -
Accr8g00813 1253 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 683 970 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00813 1253 CDD ABC_MTABC3_MDL1_MDL2 1009 1248 - -
Accr8g00813 1253 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 320 - -
Accr8g00813 1253 FunFam ABC transporter B family member 4 999 1252 - -
Accr8g00813 1253 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 20 312 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00813 1253 Gene3D ABC transporter type 1, transmembrane domain 8 595 IPR036640 GO:0005524|GO:0016020
Accr8g00813 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1248 IPR027417 -
Accr8g00813 1253 Gene3D - 337 589 IPR027417 -
Accr8g00813 1253 SUPERFAMILY ABC transporter transmembrane region 670 989 IPR036640 GO:0005524|GO:0016020
Accr8g00813 1253 ProSitePatterns ABC transporters family signature. 1148 1162 IPR017871 GO:0005524|GO:0016887
Accr8g00813 1253 Pfam ABC transporter transmembrane region 684 951 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g00813 1253 Pfam ABC transporter transmembrane region 21 285 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00813 Accr-Chr8 14711290 14717941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00813 684 1253 Calmodulin-binding Proteins AT2G36910 37.522 2.81e-109 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00813 K05658 - gmx:100804664 1786.93