Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00795 ATGGGTCTCTCTAATATCCCTAATTTAGCTGAAGGGGTGCTTCCTGTTCTCTTGGTGAACACAGTTCTATCCGTAGTTCTGCTCAAGAACATGCTGAGATCTGTGCTGGAAGCCGTTGGCGTGACATCGTCCTCGTCGTCATCTTCATCGTCTTCATCATATTCTCAGAACGCAGAGGAAGATACAGATGATGAAACAGAGAGAGAAAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGGTGTGTAGTAGAGAAGAAACAACGACGACTACGACGACAATATCGGCTACAAGTGACTCTGGTGCGAGTGTTGGATTGGGTACGGTGGAGTGTTGCGTATGTCTGTGTGGGTTCGAAGCGAACCAGGAGGTGAGTGAATTGCCGTGTAAACATTTCTTCCACAGAGGTTGTTTGGACAAGTGGTTCGATAACAAACACTTAACCTGTCCTCTGTGTCGTTCCACAGATTGA 477 0.4654 MGLSNIPNLAEGVLPVLLVNTVLSVVLLKNMLRSVLEAVGVTSSSSSSSSSSSYSQNAEEDTDDETERESWRRRRVSITQYKVCSREETTTTTTTISATSDSGASVGLGTVECCVCLCGFEANQEVSELPCKHFFHRGCLDKWFDNKHLTCPLCRSTD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00795 158 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Accr8g00795 158 MobiDBLite consensus disorder prediction 43 57 - -
Accr8g00795 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 158 IPR013083 -
Accr8g00795 158 SUPERFAMILY RING/U-box 112 156 - -
Accr8g00795 158 MobiDBLite consensus disorder prediction 43 72 - -
Accr8g00795 158 PANTHER - 1 157 IPR044249 -
Accr8g00795 158 Pfam Ring finger domain 112 155 IPR001841 -
Accr8g00795 158 SMART ring_2 113 154 IPR001841 -
Accr8g00795 158 SMART ringv_2 112 155 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00795 Accr-Chr8 14142977 14143453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00795 1 156 C3H Transcription Factor Family AT2G04240 36.875 2.33e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00795 K16285 - zju:107428465 151.369