Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00778 ATGGAACGGTATGAGATAATCAAAGATATTGGGTCTGGCAATTTCGGTGTCGCCAAGCTGGTCAAAGAGAAACGTACTGGCGATTTCTTCGCGGTCAAGTTCATTGAGAGAGGCTCCAAGATTGATGAGCATGTACAGAGAGAGATCACAAATCACAGATCCTTGAAACATCCTAACATCATTCGATTCAAGGAGGTTTTGCTGACTCCAACTCATCTGGCTATAGTCATGGAATATGCTGCTGGCGGAGAACTTTTTGAAAGAATATGTAATGCAGGAAGATTCTGTGAGGACGAGGCAAGATACTTCTTTCAACAATTGATCTCTGGTGTGAGCTATTGTCATTCCATGGAAATCTGTCACAGAGATCTCAAGCTGGAAAACACATTGTTAGATGGAAGCCCAGCTCCAAGACTTAAGATATGTGACTTTGGTTACTCAAAGTCCTCTGTTCTGCACTCTCAGCCTAAATCTACCGTAGGAACACCTGCATATATTGCACCAGAAGTATTATCAAGAAAGGAATACGATGGCAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACTTTATATGTGATGCTTGTTGGAGCTTATCCATTTGAAGATCCGGAAGACCCAAGAAACTTCAGAAAAACACTTCAGAGAATCCTTAGCGTCCACTATTCCATTCCAGATTATGTTCGTGTTTCCCAAGAATGTAGACACCTTTTATCCAGAATATTTGTGGCCAACCCTGAAAAGAGAATCACAATCCCAGAAATAAAGAAGCATCCATGGTTTCTGTATAACCTGCCAATAGAATTTATGAACGAAGGGACAAGTGGGATGGAAGAATTAGAAAGTGATGGTGTAAAAAATGAAGAAGAAGAAGCAAGTCAGAGCATAGAAGAAATACTTTCCATAATTCAAGAGGCTAGAAAAGCAGGGGAAGGTCCTAATAATGGTGATAAACTTGGAGGGTACTTCGTTGATGGAAGCATGGATCTTGATGATATTGACGCAGATGCTGACATTGATGATGTTGAAACTAGTGGTGATTTTGTCTGTGCCATTTAG 1056 0.41 MERYEIIKDIGSGNFGVAKLVKEKRTGDFFAVKFIERGSKIDEHVQREITNHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFCEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRVSQECRHLLSRIFVANPEKRITIPEIKKHPWFLYNLPIEFMNEGTSGMEELESDGVKNEEEEASQSIEEILSIIQEARKAGEGPNNGDKLGGYFVDGSMDLDDIDADADIDDVETSGDFVCAI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00778 351 Gene3D Transferase(Phosphotransferase) domain 1 80 265 - -
Accr8g00778 351 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Accr8g00778 351 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Accr8g00778 351 SUPERFAMILY Protein kinase-like (PK-like) 1 263 IPR011009 -
Accr8g00778 351 PANTHER SERINE/THREONINE KINASE 2 285 - -
Accr8g00778 351 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Accr8g00778 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Accr8g00778 351 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00778 351 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00778 351 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00778 351 CDD STKc_SnRK2 3 259 - -
Accr8g00778 351 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00778 Accr-Chr8 13479467 13482785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00778 3 287 CBL-interacting serine-threonine protein kinases AT5G25110 41.946 7.55e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Accr8g00778 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00778 K14498 - gmx:100807981 582.022