Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00774 ATGGAGGAGGAAGAGCATGAGGTGTACGGAGGCGACATCCCAGACATGGGCGAGATGGAAGGAGATTTGGATTCGCACCATGCCGATGTCGATATGTCTGCGGCCGACGACGATGCCGTCAAGGAGCTTGATGAGATGAAGAAGAGATTGAAGGAAATGGAAGAGGAAGCCGCAGCTCTTCGTGAAATGCAAGCCAAGGTTGAGAAGGAGATGGGTGCGGTTCAAGATCCAGCGAGTGCAGCTGCTTCTCAGGCAAGCAAAGAGGAGGCAGATTCTCGATCTGCTTTTGTTGGCAATGTTGATTATGCATGCACGCCTGAAGAAGTGCAGCAACACTTCCAATCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCGTACGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTGTTGCCTTGAATGAATCTGAACTGCATGGTCGTCAATTGAAGGTTATGCCAAAGAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCGAGGCGCTTCAATCCTTACATGGGGTATCGCTTCAGGAGGCCATTCCCTCCTCCTTACTTTTACTCGCCGTATGGGTATGGGAAGGTTCCCAGGTTCAGAAGGCCAAGTCGGTATATGCCATATTATTAG 666 0.4955 MEEEEHEVYGGDIPDMGEMEGDLDSHHADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAASQASKEEADSRSAFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEAVALNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPSRYMPYY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00774 221 MobiDBLite consensus disorder prediction 68 92 - -
Accr8g00774 221 Coils Coil 36 70 - -
Accr8g00774 221 Gene3D - 29 165 IPR012677 -
Accr8g00774 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Accr8g00774 221 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 24 177 - -
Accr8g00774 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 163 IPR000504 GO:0003723
Accr8g00774 221 SUPERFAMILY RNA-binding domain, RBD 83 191 IPR035979 GO:0003676
Accr8g00774 221 CDD RRM_II_PABPs 94 164 - -
Accr8g00774 221 SMART rrm1_1 94 165 IPR000504 GO:0003723
Accr8g00774 221 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00774 Accr-Chr8 13380182 13384182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00774 90 164 Eukaryotic Initiation Factors Gene Family AT2G36660 36.842 4.39e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00774 K14396 - tcc:18611531 343.199