Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00762 ATGGCTGTTACACCTTTCGGAAGCACATCTGTTGCACAATGGGGAGTTTGTCCTCAATTTTTCTTGAGATCCTGTTTGACTGGCAAAAGTGTATCATCTGGATACAATGTTTCAAGCAGGGTTAGTTTTATGGCTTCTGTGAGTTCAAATTTTTTGTCTCGGGGTTCCTTGCACCTCCTATTTGGCCTGGATTCATCTCAAACATTACATCATCGCAGGGGATCAAGGTTGATAGTTAGAGCAGATAAAGATTACTATTCTGTCCTTGGGGTGTCAAGAAATGCCAGTAAATCTGAAATTAAGAGCGCTTATCGTAAACTTGCCCGGAATTATCACCCAGATGTGAACAAAGAAGCTGGAGCAGAACAGAAATTTAAGGAAATCAGCAATGCATATGAGGTCTTATCAGATGATGAGAAGAAATCCATATATGACACATACGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGAGATTTCAGCAATCCTTTTGATCTATTTGAGACGCTGTTTGAGGGCATGGGCATGAACCGCGGCATGAACAACAGAGGCTCTTGGAATGGAGCTGCTGATGGTGAAGATGAATATTACAGTCTTGTCTTGAACTTCAAAGAAGCAGTTTTTGGGGTAGAAAAAGAGATAGAGATAAGCCGACTAGAGAATTGTGGAACTTGCAATGGTACCGGGGCCAAGCCTGGGACCACGCCAACCAGATGTAGCACCTGTGGAGGCCAAGGCCGGGTTGTCTCGTCAACAAGGACACCCTTGGGTATTTTCCAGCAGTCAATGATATGCTCTGCATGTAACGGAGCCGGGGAAATTTCAACACCTTGCAACACATGTTCTGGGGATGGTCGACTGAGGAGGACAAAGCGGATAAGCCTGAAAGTTCCACCTGGTGTGGATTCTGGTAGCCGTTTAAGGGTCCGAAGTGAAGGGAATGCTGGAAGACGAGGTGGTTCTCCGGGTGACCTCTTTGTTGTCATTGAAGTCATTCCAGATCCTGTCCTCAAGCGTGACGACACTAACATCCTCTACACTTGTAAGGTGTCATACATTGATGCAATATTGGGAACTACAATCAAGGTCCCCACCGTAGACGGAATGGTTGATCTAAAAATCCCGGCTGGGACCCAACCCAATACGACACTCGTCATGGCAAAGAAAGGTGTCCCCTTTCTGAATAAAAGCAGCATGAGGGGTGATCAATTGGTTCGTGTGCAAGTTGAAATACCTAAAAAACTCAACAGTGAAGAGAGGAAGCTTATTGAGGAGCTTGCTGATTTAAGCAAAGGCAAGGCTGCGGCAGGTAAAAGATAA 1326 0.4555 MAVTPFGSTSVAQWGVCPQFFLRSCLTGKSVSSGYNVSSRVSFMASVSSNFLSRGSLHLLFGLDSSQTLHHRRGSRLIVRADKDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEAGAEQKFKEISNAYEVLSDDEKKSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGMNRGMNNRGSWNGAADGEDEYYSLVLNFKEAVFGVEKEIEISRLENCGTCNGTGAKPGTTPTRCSTCGGQGRVVSSTRTPLGIFQQSMICSACNGAGEISTPCNTCSGDGRLRRTKRISLKVPPGVDSGSRLRVRSEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPFLNKSSMRGDQLVRVQVEIPKKLNSEERKLIEELADLSKGKAAAGKR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00762 441 PRINTS DnaJ domain signature 120 140 IPR001623 -
Accr8g00762 441 PRINTS DnaJ domain signature 104 119 IPR001623 -
Accr8g00762 441 PRINTS DnaJ domain signature 86 104 IPR001623 -
Accr8g00762 441 PRINTS DnaJ domain signature 140 159 IPR001623 -
Accr8g00762 441 SUPERFAMILY Chaperone J-domain 80 178 IPR036869 -
Accr8g00762 441 CDD DnaJ_C 195 417 - -
Accr8g00762 441 CDD DnaJ 84 137 IPR001623 -
Accr8g00762 441 FunFam Molecular chaperone DnaJ 216 292 - -
Accr8g00762 441 SMART dnaj_3 83 140 IPR001623 -
Accr8g00762 441 Hamap Chaperone protein DnaJ [dnaJ]. 81 437 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr8g00762 441 Pfam DnaJ C terminal domain 199 414 IPR002939 -
Accr8g00762 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 339 425 IPR008971 GO:0006457|GO:0051082
Accr8g00762 441 Pfam DnaJ central domain 224 287 IPR001305 GO:0031072|GO:0051082
Accr8g00762 441 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 290 IPR036410 -
Accr8g00762 441 Gene3D - 194 329 - -
Accr8g00762 441 MobiDBLite consensus disorder prediction 302 321 - -
Accr8g00762 441 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Accr8g00762 441 CDD DnaJ_zf 224 287 IPR001305 GO:0031072|GO:0051082
Accr8g00762 441 FunFam Putative Mitochondrial DnaJ chaperone 279 329 - -
Accr8g00762 441 Gene3D - 334 440 - -
Accr8g00762 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 346 IPR008971 GO:0006457|GO:0051082
Accr8g00762 441 ProSiteProfiles Zinc finger CR-type profile. 211 292 IPR001305 GO:0031072|GO:0051082
Accr8g00762 441 FunFam Chaperone protein dnaJ 1, mitochondrial 334 441 - -
Accr8g00762 441 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 42 437 - -
Accr8g00762 441 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Accr8g00762 441 FunFam Chaperone protein dnaJ A6 chloroplastic 81 184 - -
Accr8g00762 441 NCBIfam molecular chaperone DnaJ 84 430 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr8g00762 441 Pfam DnaJ domain 84 145 IPR001623 -
Accr8g00762 441 Gene3D DnaJ domain 81 185 IPR036869 -
Accr8g00762 441 Gene3D - 224 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00762 Accr-Chr8 13162674 13167021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00762 85 147 C2H2 Transcription Factor Family AT1G74250 43.478 8.59e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00762 K03686 - gmx:100811006 740.339