Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00711 ATGACGAGTACACTTGCTTGGAGGTTTGGTTCCAATAATGGTAGCAGCCTTGCTGCTAATGATATGGAAAGAAATGGCGAGGGGAACATACCAGAGTCAGAGCCCCCAACTCCGCATTCTGTTTTGAAGATGGGATTGAGAGACCGCAGCAGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGACAGAGCTCATCCTCTGCACAAGAGAAGGAGTACTCCTTGAGGCAGTTATTGGAGCTTATTGATATGCGTGAGAATGCATTTAGTGCTGTTGGATCTCATTCTCAGGCAGTACCAGTGCTTGTTTCTCTTCTCCGATCTGGTTCATTGAGTGTGAAAATTCAGGCAGCAACTGTTCTAGGCTCCCTCTGTAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTTAAATCCAGTTCAGCTGAAGGGCAAGTTGCTGCTGCAAAAACTATTTATGCTGTCTCTCAAGGTGGTTCAAAAGACCATGTTGGATCAAAAATTTTTTCAACTGAAGGAGTAGTACCTGTGCTGTGGGAGCAGCTTCAGAAGGGGTTGAAGACTGGAAATGTAGTTGATGGTTTATTGACCGGAGCATTGAAAAATCTATCCAGTAATACTGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACATATTAATGAAGTTATTGACAACAGGGCATCCCAGTACTTTAGCTAATGTGTGCTTCTTACTTGCCAGCGTGATGATGGAGGATGCATCCGTTTGTTCAAAGGTGTTGACTTCTGAGGCGACAAAACAACTCCTGAAATTATTAGGCCCTGGTAATGATGCCCCTATTAGAGCGGAAGCAGCTGGTGCTCTGAAATCTTTGTCTTCTCAGTGCAAAGAAGCAAGGCGTGAGATAGCTAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCGAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCATTGCAGGAAAATGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTGTCTTACGTCATCTCTAGCCTTGGTGAAAGCCTTGAATCATGCAGCTCAGCTACTCAAATTGCTGATACATTGGGGGCTTTGGCTTCAGCCCTTATGATATATGATAACAAGGCTGAAGCTACGAGAACATCGGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAACTCAAATCTCAATCACCTTTTCTTGTGAAGGAACGAACCATTGAAGCCCTGGCTAGTTTGTATGGAAATCCCGTACTGTCAATTAAACTTGCAAATTCAGATGCAAAACATTTGCTAGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGATGACCTTATAAGAGCTCTCCTCACATTGTGCAACAATGAAGGCAGTCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGCTGATATCTCTTCTGGGGCTTTCATCAGAACAACAACAAGAATGTGCGGTTGCTCTGCTATGTCTTCTATCTAATGAAAATGATGACAGTAAATGGGCCATTACTGCAGCTGGTGGTATACCTCCGTTAGTTCAAATTTTGGAGACAGGATCCACGAAAGCAAAAGAAGACTCAGCAAAGATCCTTACAAACCTGTGCAATCACAGTGAAGATATACGTGCTTGTGTGGAGAGTGCTAATGCTGTTCCTGCGTTGTTGTGGCTATTGAAGAATGGAAGCCCTAATGGGAAGGAGATAGCAGCGAAAACCTTAAACCACTTAATTCATAAATCTGATACTACCACAATCAGCCAGCTTACAGCATTATTGACAAGTGATCTACCGGAATCTAAGGTCTATGTTTTAGATGCTTTGAAAAGTATGCTGTCGGTTGCCCCTCTTAGTGACATTCAACGAGAAGGCAGTGCTGCAAGTGATGCAATAGAGACAATGATAAAATTAATGAGCTCTACCAAAGAGGAAACTCAGGCTAAGGCAGCATCTGCTCTAGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGTGTCGCTGTTAAAGCTCTCATGTCAGCCATGAAGTTGCTTAATATTGAATCTGAAAGCATCCTAATAGAGTCTTCACACTGCCTTGCGGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTGTTGCTAGAGATGCAATACTCCCCTTAGTTACACTAGCAAATTCTTCTGATTTGGACGTTGCAGAGTTGGCAACATGTGCGGTGGCTAATCTTATTTTAGATAGAGAGATTTCAGAGAAAGCTGTTGCTGAAGAAGTTATCTTGCCTGCTACCAGAGTATTACGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCAGCAATTGCTCGGCTCATACATCATCGGCAAGTTGATTATTCTATAACTGAATGTGTGAATCGTGCTGGGACCGTACTTGCTTTGGTTTCCTTCCTGGATTCTGCTATTATTGGATCAGTTTCCACATCTGAGGCTATAGAAGCACTTGCTGCTCTGTCCAGGTTGGAACAGAATAGTGCACATATAAAACCGACATGGGCTGTATTGGCTGAATTACCTGAGAGTATAAATCCAATAGTTCTGTCTATTGCTGATTCAACACCAATTTTTCAAGATAAAGCTATCGAGATATTATCCCAGTTATGCAGGGATCAGCCTGTTGTTCTGGGAAACAATGTTCTTGCGGCCTCGGGATGCTTGTGTTCATTGGCTAAAAGGGTAACTGGTGCCAAAAATGTAAAGGTCAAAATCGGGGGAGCTGCACTTCTTATTTGTGCTGCCAAAGTAAACCACCAGAGACTGGTGGAGGAACTCAACCAATCAAACTTGTGTGTTGATCTTGTTCAATCTCTTGTTAATATTCTTTCTTCTGCACTGCCTTTGTCAAACCCGGGTGAAGAAAACAAGGAATTCATTAGCATTATCATACATAGAAAAGAAGATGCTAATGGAGGTGATTCCAACACAGGCTCTGCCACTGTGACTGTATCCGATGTCAACCTAGCCATATTGTTATTGTCTATTCTTGCCTGTCACGATGAAAAATGCAAAATTGCTATAATGGAGGCTGGAGCAATTGACATTCTTACTGAAAAAATCTCAGAATGTTACTCGCAATATACCCAGGTTGATTATAAAGAAGATAGTAGCATGTGGATCTGTGCATTGTTGTTGGCTGTATTATTTCAAGATAGAGATATCATTAGAGCACATGCCACCATGAAATCTGTACCAGCTGTTGCCAGTTTATTGAAGTCGGAGGAATTAGCTAACAGATATTTTGCAGCACAATCAGTAGCCAGCCTTGTCTGTAATGGAAGCAGGGGAACACTACTCTCTGTTGCTAATTCAGGGGCTGCAAGTGGGCTCATCTCATTACTTGGCTGTGCCGACATTGATATGCAGGATCTTCTGGACTTGTCAGAGGAGTTCTCCTTGGTTCGTCATCCTGATCAAGTTGCTCTAGAGAGGTTGTTCAGAGTTGATGACATTAGGGTTGGTGCCACTTCACGGAAGGCAATACCTGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCTTTTTTAGCTCTTGGACTTCTAACTCAGCTCGCCAGAGACTGCCCATCTAATAAGATTGTAATGGTGGAATCTGGGGCCTTGGAGGCACTTACAAAGTATCTTTCACTGGGTCCCCAAGATGCCACTGAAGAAGCTGCTACTGATCTATTGGGAATTCTATTTGACAGTGCTGAGATACGGAGACATGAGGCAGCATTTGGTGCTGTTTCTCAACTTGTGGCTGTGTTACGTTTAGGAGGAAGAGGTGCAAGGTACAGTGCTGCCAGGGCATTGGAAAATTTGTTCTCTGCCGATCAGATTAGGAATGCAGAGACTGCTCGCCAAGCTGTTCAACCCTTGGTGGAGATTCTTGGCACTGGTTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTAAGCGAAAATCCTTCAAGAGCACTAGCTGTTGCTGATGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGATCCTTTCATCAAATTGTTCATTGGACCTCAAAGGGGATGCGGCTGAATTATGTTGTGTTCTGTTTGGAAACACACGGATTAGGTCCTCCATGGCTGCTGCTCGCTGTGTTGAACCTTTAGTTTCTCTCCTTGTAAGCGAGTTTAGTCCTGCCCAGCATTCAGTTGTCCGTGCACTGGATAGGCTTGTTGATGATGAGCAATTGGCTGAACTAGTTGCTGCTCATGGTGCCATTATTCCTCTTGTTGGTCTTCTGTATGGTAGGAATTATTTGCTCCATGAGGCCATTTCTAGAGCTCTGGTTAAGCTAGGAAAAGATAGACCTTCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTTGATATTCTTCATGAAGCACCTGATTATCTGTGTGCGGCATTTGCTGAATTGCTGCGTATATTGACCAATAATGCCAGCATAGCTAAAGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGACGAGACAAGAATTTGGGCCTGATGGACAACATAGTGCGTTGCAGGTTTTGGTTAATATCTTGGAACATCCACAGTGTCGTGCTGACTATACATTGACATCCCACCAAGCTATTGAACCACTTATCCCCTTGCTTGATTCTCCAATACCAACAGTGCAACAGTTGGCTGCTGAGCTTCTCTCACATCTGCTTTTGGAGGAACACCTTCAAAAGGATCCTGCTACACAGCAGGTAATTGGTCCTCTTATTCGAGTCCTTGGTTCTGGCATCCATATATTGCAGCAGAGAGCTGTAAAGGCCCTTGTTAGTATTGCACTGATATGGCCGAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAGCTTTCGAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAATTCAGCTCTGAATTCTACTTGGAAGTGCCTATTGCTGTATTAGTAAGATTGCTTCGTGCTGGCTCAGAGAGCACTGTAATTGGTGCATTAAATGCTCTTCTAGTGCTGGAAAGTGATGATGGGACTAGTGCAGAAGCAATGGCTGAAAGTGGCGCCATAGAGGCTCTCTTAGAGCTTCTAAGATCTCATCAGTGTGAGGAAACTGCTGCTAGACTTCTGGAAGTATTGCTAAACAACGTCAAGATTAGAGAAAGTAAAGCTACCAGATCAGCCATTGTACCATTATCTCAGTACCTCCTGGATCCACAAACCCAAGGACAGCAAGCAAGGTTACTGGCAACTTTGGCTCTTGGGGATCTATTTCAGAATGAGAGTCTTGCTCGAGCAAGTGATGCAGTTTCAGCATGTCGTGCTTTGGTGAATGTGCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTCGCTATATGTGCTTTGCAGAACCTAGTGATGCATAGTCGATCAAATAAAAGAGCGGTTGCTGAGGCTGGTGGTGTACAGGTCATATTGGATCTGATAGGTTCTAGTGATCTGGAAACATCAGTTCAGGCTGCAATGTTCATCAAACTTCTCTTCTCTAACCATACAATTCAAGAATATGCTTCAAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAAATGTTAATGATGAGTATCTGAGAGCCTTGAACGCTCTGTTTAGCAACTTCCCACGACTGAGAGCAACTGAGCCAGCAACACTTAGCATTCCTCATCTCGTTACATCATTAAAGACGGGCTCTGAGGCCACTCAAGAAGCTGCATTGGACGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGTCCAGCGGAAGTCTCAAGGGCTCAGTCAATAGCAGCTGCAGATGCTATTCCTTTGCTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCTTACTGCAGTGTTTGCCTGGCACATTAGTTGTGATCATAAAACGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTCGGCAACACTCCTCCAAGGCAAACCATGGTGGTCTCAACTGGCCCTAATCCGGAATGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGCGTGGTAATGCTTGGATCTGTAGCCGGAGAATACACTCTGCTGCCACAAAGCAAAAGTGGCCCCTCAAGGAATTTAGAGATTGAATTCCAGTGGTCTAACAAGTGA 6462 0.4403 MTSTLAWRFGSNNGSSLAANDMERNGEGNIPESEPPTPHSVLKMGLRDRSSSSMEDPDGTLASVAQCIEQLRQSSSSAQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGSKDHVGSKIFSTEGVVPVLWEQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIQAGGVDILMKLLTTGHPSTLANVCFLLASVMMEDASVCSKVLTSEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREIANSNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGESLESCSSATQIADTLGALASALMIYDNKAEATRTSDPLVVEQTLLKQLKSQSPFLVKERTIEALASLYGNPVLSIKLANSDAKHLLVGLITMAVNEVQDDLIRALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDDSKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALKSMLSVAPLSDIQREGSAASDAIETMIKLMSSTKEETQAKAASALAGIFEMRKDVRESSVAVKALMSAMKLLNIESESILIESSHCLAAIFLSIKENRDVAAVARDAILPLVTLANSSDLDVAELATCAVANLILDREISEKAVAEEVILPATRVLREGTISGKTHAAAAIARLIHHRQVDYSITECVNRAGTVLALVSFLDSAIIGSVSTSEAIEALAALSRLEQNSAHIKPTWAVLAELPESINPIVLSIADSTPIFQDKAIEILSQLCRDQPVVLGNNVLAASGCLCSLAKRVTGAKNVKVKIGGAALLICAAKVNHQRLVEELNQSNLCVDLVQSLVNILSSALPLSNPGEENKEFISIIIHRKEDANGGDSNTGSATVTVSDVNLAILLLSILACHDEKCKIAIMEAGAIDILTEKISECYSQYTQVDYKEDSSMWICALLLAVLFQDRDIIRAHATMKSVPAVASLLKSEELANRYFAAQSVASLVCNGSRGTLLSVANSGAASGLISLLGCADIDMQDLLDLSEEFSLVRHPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVSQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILGTGLEKEQHAAIATLVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSMAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPSCKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPIPTVQQLAAELLSHLLLEEHLQKDPATQQVIGPLIRVLGSGIHILQQRAVKALVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRESKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARASDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMHSRSNKRAVAEAGGVQVILDLIGSSDLETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGNVNDEYLRALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTMVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGPSRNLEIEFQWSNK 2153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00711 2153 Gene3D - 614 821 IPR011989 -
Accr8g00711 2153 Gene3D - 51 402 IPR011989 -
Accr8g00711 2153 MobiDBLite consensus disorder prediction 1 59 - -
Accr8g00711 2153 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 537 579 IPR000225 GO:0005515
Accr8g00711 2153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2031 2150 IPR035892 -
Accr8g00711 2153 SUPERFAMILY ARM repeat 1582 2030 IPR016024 -
Accr8g00711 2153 Pfam Armadillo/beta-catenin-like repeat 105 135 IPR000225 GO:0005515
Accr8g00711 2153 Pfam Armadillo/beta-catenin-like repeat 526 565 IPR000225 GO:0005515
Accr8g00711 2153 SUPERFAMILY ARM repeat 973 1391 IPR016024 -
Accr8g00711 2153 Pfam C2 domain 2032 2122 IPR000008 -
Accr8g00711 2153 ProSiteProfiles C2 domain profile. 2013 2130 IPR000008 -
Accr8g00711 2153 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1382 1616 - -
Accr8g00711 2153 SUPERFAMILY ARM repeat 536 910 IPR016024 -
Accr8g00711 2153 CDD C2 2034 2124 - -
Accr8g00711 2153 Gene3D - 403 613 IPR011989 -
Accr8g00711 2153 Gene3D - 1383 1616 IPR011989 -
Accr8g00711 2153 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1198 1242 IPR000225 GO:0005515
Accr8g00711 2153 Gene3D - 822 1171 IPR011989 -
Accr8g00711 2153 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1827 1870 IPR000225 GO:0005515
Accr8g00711 2153 MobiDBLite consensus disorder prediction 1 22 - -
Accr8g00711 2153 SMART C2_3c 2033 2129 IPR000008 -
Accr8g00711 2153 Coils Coil 298 325 - -
Accr8g00711 2153 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2032 2153 - -
Accr8g00711 2153 SUPERFAMILY ARM repeat 66 294 IPR016024 -
Accr8g00711 2153 SUPERFAMILY ARM repeat 1326 1656 IPR016024 -
Accr8g00711 2153 Gene3D - 1178 1382 IPR011989 -
Accr8g00711 2153 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2153 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Accr8g00711 2153 Gene3D - 1618 2031 IPR011989 -
Accr8g00711 2153 SUPERFAMILY ARM repeat 219 610 IPR016024 -
Accr8g00711 2153 SMART arm_5 269 310 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1273 1313 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1732 1771 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1400 1440 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 526 566 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1859 1899 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1568 1609 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 95 136 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 312 361 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 818 863 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1441 1481 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 137 177 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1483 1523 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1315 1354 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 734 772 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 568 608 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 647 687 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1186 1229 IPR000225 GO:0005515
Accr8g00711 2153 SMART arm_5 1231 1272 IPR000225 GO:0005515
Accr8g00711 2153 Gene3D C2 domain 2032 2153 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00711 Accr-Chr8 11776621 11785880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00711 489 621 U-box Gene Family AT2G23140 40.000 9.09e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00711 - - gmx:100816765 3541.9