Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00706 ATGATGGCTCTCTCTGAGATGTTCTCTCAACTTTGCACCAAGGCCGTAGTCCTGTTGGCTTTGCTTCTAATACAACTCATGCTCCTTACAAAGAAGCTCAGATCAGATACACGTCCAATTACTACCACCCAATATCTCAAACTCATCGAACGGAAGAACCCCACAACTTGTTTCACCAAGAGATTGAGGCAAGAAGATGCAGAGTGCAGGGTGTGTTTATCTGAATTCCAAGAAGGGGAAAAGGTGAGGAACTTGAAATGTAAACACACATTTCACAGAGATTGCTTGGACAAGTGGTTGCAGCAATATTGGGCTACCTGCCCTCTTTGCAGGAACCAAATTCTGCCAGATGATATTGTGGCCAAGTATCGTGAGCCTCAGAATCAGGGGGGCTACATCTTCTCCTTTTGGGATCTTGCTGAATAA 426 0.4484 MMALSEMFSQLCTKAVVLLALLLIQLMLLTKKLRSDTRPITTTQYLKLIERKNPTTCFTKRLRQEDAECRVCLSEFQEGEKVRNLKCKHTFHRDCLDKWLQQYWATCPLCRNQILPDDIVAKYREPQNQGGYIFSFWDLAE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00706 141 SMART ring_2 69 110 IPR001841 -
Accr8g00706 141 PANTHER - 1 129 - -
Accr8g00706 141 Pfam Ring finger domain 68 111 IPR001841 -
Accr8g00706 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 116 IPR013083 -
Accr8g00706 141 ProSiteProfiles Zinc finger RING-type profile. 69 111 IPR001841 -
Accr8g00706 141 SUPERFAMILY RING/U-box 51 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00706 Accr-Chr8 11571378 11571943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00706 67 122 C3H Transcription Factor Family AT1G15100 53.571 2.29e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00706 K16282 - gmx:102668078 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00706 8 11571378 11571943 Accr8g00706 8 11571378 11571943 CCT
Accr8g00706 8 11571378 11571943 Accr8g00706 8 11571378 11571943 ECH