Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00665 ATGAAACCTAATAAGGCCCCCACTTGCTATCACTTCTTTTTCTTCATATTCTTCTCCCTCGCTGTTCTTTCTCTCCAATCTCCTTCTTCATCCTCTGCTTTTTCAGCCTTCCGAGATTCCCCTCAACCATTAATCAGCTTCAAGTCCTCTCTCTCAGACCAATCTCTGCTCCAAAACTGGCTCCCAAATCAAAACCCATGTTCTTTCACTGGGATTTCCTGCAAGCAAACCGGGTTTTATTCCATAGACCTCAGCTTCATCTCCTTGCACACAAACTTCAGTGTCGTCTCTGTCAATCTTCTCACACTTAACCATCTGGAAGCTCTTAACCTCACGCACGCCAATCTTACTGGTACCATTTCTGTGCTCCCGCATGCGTTCCAGTGTGGTGCCTCATTGAGCAGTATAGATCTATCTCATAACAAATTGTCTGGTTCTGTTTCGGACATATCCTATCTCAGCTCCTGTTCAAGTTTGAACTCTCTCAACCTTTCTAATAATGATTTTGAGTTTTCTCCGAAAGATTCCACCGGCTTGAGACTCAATCTCCAGGTCCTGGATATTTCTTTCAATAATGATATTTCCGGTCCAAATGTTCTCCGTTGGATCTTATCTCCAGGTTGCGACGATATGCAAGTGTTGGCTCTCAGAGGAAACAAGGTCACCGGAGAAATCAATTTCTCAAACTGCCAGAAATTGCAGCATTTGGACCTTTCTGCTAATAATTTTTCCGCCGCTGTTCCTTCGTTCGGTGAATGTTCGGCGTTAGAGTACCTTGATATCTCTGCTAACAAGTATTTCGGCGACATTGGCCTCGCTCTCTCTCCCTGCAAGAAGCTCAGCCACCTCAACGTTTCAAGCAACCAGTTCGCCGGTCCGGTTCCATCGCTTCCGGTGGACTCTCTGCAGTTCCTTTATATCGCAGGCAACAAGTTCCATGGTCAGATTCCGGAACGACTGGCGGGTTTGTGCACCACTATCGTCGAGCTCGATCTTTCCTCGAACTCCCTCACCGGTACGATTCCGCGCGGTCTTAGCGCCTGTTCTTCGCTGGAATTGTTTGACATATCTAATAACCAGTTTTCCGGTAAGTTACCGATTGAAATTTTCGTGGAGATGATCAGCTTGAAGAAGCTAGTTCTCTCATTCAATCATTTCGACGGTAATTTGCCGGATAATCTCTCGAAGCTCACAAGCTTGGAATCGTTGGATTTGAGTTCCAATAACTTCTCGGGGCCAATACCTGGAGGGCTATGTCAAGATCCTAGGAACAATTTGAAAGAATTATTCCTGCAGAATAATGGGCTCACGGGTTTCATTCCACCCACAATCAGCAACTGTTCTCAGCTTGTTTCATTGGATTTAAGTGTCAACTTCTTGAAGGGGACTATCCCTTCTAGCTTGGGGTCTCTTTCGAAGCTTCGTGATTTGATTATGTGGCTAAATCAGCTCGAAGGTGAAATACCTCAAGAGCTCATGTACATTAAGACCCTTGAGAATTTGCTCCTGGACTTCAATGATCTCACAGGGAATATTCCTTCTGGTTTAAGAAACTGTACCTCCTTGAAGTGGATCTCCTTGTCTAATAACAGATTGAGCGGAGAGATTCCTGCTTGGATTGGCCAGCTTTTCAACCTTGCAATCCTGAAGCTGAGCAATAACTCATTCTCTGGGAGGATTCCACCGGAACTTGGTGATTGTCGCAGTTTGATCTGGTTGGATCTAAATACAAATTCCCTCAATGGGTCAATTCCTCCTGAATTGTTCAAGCAATCTGGCAAAATCACTGTGGATTTCATAAGTGGAAAAACTTATGTGTATATCAAGAATGATGGCAGCGAGGCATGCCATGGAGCTGGGAATTTACTAGAGTTTGCTGGGGTCAATTCTGAGCAGTTGAACAGAATTTCTACAAGGAATCCCTGTAACTTCACTAGAGTTTATCGCGGTAATCTCCAACCTACATTTAGTAATAATGGGTCTATGATTTTTTTGGATCTTTCATACAATAGGTTGTCGGGCAGTATACCAAAAGAGATTGGGAATTTGTACTATGTAGATATTCTGAATTTGGGTCACAACAACCTATCTGGAAATATTCCAGAAGAGCTTGGGAAGGCAATAAAAATGGACATACTTGATCTCTCATGGAATAGGCTTGAAGGACAAATTCCACAGTCCTTGACTGGCCTTTCCATGCTCTCTGAAATTGATCTGTCAAACAACTTTCTACGGGGAGCGATTCCTGACTCTGCTCAGTTTGTAACCTTTTCTCCCAACAGTTTCGCAAATAATTCTGGTCTCTGCGGATACCCTCTTGCTAAATGTGAGGGACACTTAGGATCGGGTTCAGATGCTCAACATCAGAAATCCCGAAGGAGGCAAGCATCTCTTGTAGGTAGTTTGGCTTTGGGATTGCTATTCTCCCTATTCTGTATCATTGGTGCAATTATAATTGCCCTGGAGACCAGAAAGAGGAGGAAGAATAAGGAAGCTGCACTAGATGCCTACATGGAAAACAATTCTCATTCAGGTACTGGCAACAATATAAACTGGAAGCTCACGAGTGCCCGTGAAGCACTAAGCATAAACCTTGCAGCATTCGAGAAACCCATCCGGAAACTCACCTTTGCACATCTCCTTGAAGCTACTAATGGCTTCCACAATGATAGTCTTATTGGTTCTGGTGGTTTTGGTGATGTCTACAAGGCTCAGCTGAAGGATGGAAGTGTTGTGGCTATCAAGAAACTGATACATATTAGTGGTCAAGGTGACAGGGAATTCACAGCTGAAATGGAAACCATTGGCAAAATCAAGCATCGCAACTTAGTTTCCCTTCTGGGTTACTGCAAGGTGGGGGAAGAGAGACTCCTGGTTTACGAATTCATGAAATACGGAAGTCTAGAAGATGTTTTGCATGACCGGAAGAAGGCCGGGGTCAAGCTGAACTGGGCTGTAAGAAGGAAAATAGCCATTGGGGCTGCTAGGGGATTGGCTTTTCTTCACCATAATTGCATCCCACACATCATTCATAGAGACATGAAGTCCAGTAATGTATTGCTGGATGAGAATTTGGAATCCAGAGTCTCTGATTTCGGCATGGCTAGGCTTATGAGTGCTGTGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGCTATGTTCCTCCTGAATATTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTATATAGTTACGGTGTAGTTTTACTGGAGCTGCTAACGGGGAGACGCCCGACGGATTCAGCGGATTTTGGCGACGACAATAATCTCGTGGGATGGGTTAAACAACATGTAAAACTGAGAGTGAATGAAGTTTTTGATCCAGAGCTCTTGAAAGAGGATCCTAGTCTTGAGAATGAGCTTCATCAACACTTGAAAGTTGCTTGTGCTTGTTTGGATGATCGACCGTGGCGGCGTCCCACAATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAAGCTGGATCTGGCATTGATTCCCAATCCACCATAGACACTGAAGATGGAGAATTTGGTTCAGTTGAAATGGTAGATATGAGCATTAAAGAAGCCCCCTGA 3591 0.4425 MKPNKAPTCYHFFFFIFFSLAVLSLQSPSSSSAFSAFRDSPQPLISFKSSLSDQSLLQNWLPNQNPCSFTGISCKQTGFYSIDLSFISLHTNFSVVSVNLLTLNHLEALNLTHANLTGTISVLPHAFQCGASLSSIDLSHNKLSGSVSDISYLSSCSSLNSLNLSNNDFEFSPKDSTGLRLNLQVLDISFNNDISGPNVLRWILSPGCDDMQVLALRGNKVTGEINFSNCQKLQHLDLSANNFSAAVPSFGECSALEYLDISANKYFGDIGLALSPCKKLSHLNVSSNQFAGPVPSLPVDSLQFLYIAGNKFHGQIPERLAGLCTTIVELDLSSNSLTGTIPRGLSACSSLELFDISNNQFSGKLPIEIFVEMISLKKLVLSFNHFDGNLPDNLSKLTSLESLDLSSNNFSGPIPGGLCQDPRNNLKELFLQNNGLTGFIPPTISNCSQLVSLDLSVNFLKGTIPSSLGSLSKLRDLIMWLNQLEGEIPQELMYIKTLENLLLDFNDLTGNIPSGLRNCTSLKWISLSNNRLSGEIPAWIGQLFNLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNSLNGSIPPELFKQSGKITVDFISGKTYVYIKNDGSEACHGAGNLLEFAGVNSEQLNRISTRNPCNFTRVYRGNLQPTFSNNGSMIFLDLSYNRLSGSIPKEIGNLYYVDILNLGHNNLSGNIPEELGKAIKMDILDLSWNRLEGQIPQSLTGLSMLSEIDLSNNFLRGAIPDSAQFVTFSPNSFANNSGLCGYPLAKCEGHLGSGSDAQHQKSRRRQASLVGSLALGLLFSLFCIIGAIIIALETRKRRKNKEAALDAYMENNSHSGTGNNINWKLTSAREALSINLAAFEKPIRKLTFAHLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVSLLGYCKVGEERLLVYEFMKYGSLEDVLHDRKKAGVKLNWAVRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLESRVSDFGMARLMSAVDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDDNNLVGWVKQHVKLRVNEVFDPELLKEDPSLENELHQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIDTEDGEFGSVEMVDMSIKEAP 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00665 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 423 601 - -
Accr8g00665 1196 FunFam Brassinosteroid LRR receptor kinase 963 1165 - -
Accr8g00665 1196 Gene3D - 598 658 - -
Accr8g00665 1196 Pfam Protein kinase domain 887 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00665 1196 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 425 1161 - -
Accr8g00665 1196 FunFam serine/threonine-protein kinase BRI1-like 2 848 962 - -
Accr8g00665 1196 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 654 776 - -
Accr8g00665 1196 SMART serkin_6 887 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00665 1196 Pfam Brassinosteroid receptor island domain 593 657 IPR045381 -
Accr8g00665 1196 SUPERFAMILY RNI-like 301 588 - -
Accr8g00665 1196 ProSiteProfiles Protein kinase domain profile. 887 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00665 1196 FunFam Serine/threonine-protein kinase BRI1-like 1 600 657 - -
Accr8g00665 1196 SUPERFAMILY L domain-like 63 364 - -
Accr8g00665 1196 PRINTS Leucine-rich repeat signature 133 146 - -
Accr8g00665 1196 PRINTS Leucine-rich repeat signature 397 410 - -
Accr8g00665 1196 Gene3D Ribonuclease Inhibitor 44 776 IPR032675 -
Accr8g00665 1196 Pfam Leucine Rich Repeat 425 447 IPR001611 GO:0005515
Accr8g00665 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 207 422 - -
Accr8g00665 1196 SUPERFAMILY Protein kinase-like (PK-like) 869 1160 IPR011009 -
Accr8g00665 1196 SUPERFAMILY L domain-like 653 772 - -
Accr8g00665 1196 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Accr8g00665 1196 Gene3D Phosphorylase Kinase; domain 1 848 962 - -
Accr8g00665 1196 Gene3D Transferase(Phosphotransferase) domain 1 963 1165 - -
Accr8g00665 1196 ProSitePatterns Protein kinases ATP-binding region signature. 893 916 IPR017441 GO:0005524
Accr8g00665 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Accr8g00665 1196 Pfam Leucine rich repeat N-terminal domain 44 74 IPR013210 -
Accr8g00665 1196 SMART LRR_typ_2 425 447 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 156 179 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 543 567 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 103 129 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 397 421 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 373 396 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 568 591 IPR003591 -
Accr8g00665 1196 SMART LRR_typ_2 731 754 IPR003591 -
Accr8g00665 1196 CDD STKc_IRAK 893 1163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00665 Accr-Chr8 10690838 10694428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00665 30 1196 Receptor kinase-like Gene Family AT4G39400 68.000 0.0 1539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr8g00665 Pkinase 3.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00665 K13415 - qsa:O6P43_023302 1740.32