Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00656 ATGTGTTTCTTCTTAAAGGTGGCGAATCCTCCGAATAACTCTCCCAATCACAACAACGTTGTTGATGAACACAACACAATTGTCTTCCCTGGTATGGATAGGGACAGAGAGATGTCTACTATGATCTCTGCTTTGACCCACGTTGTCGCTGGAGATATTCCCGATGATTCTGCTGGGATTTCTGGCGGTGGCGGTGACGGTGACGGTCGCGGTGGAGGTGGAGGGGGCTCTGTTACATTAAGCTCGCCGTCGGATTTGACGACGCCATCTTCGTCTTCTTCGTCTTATGGTGGTAGCTCTGTTTTGAAGAGAAGTAGGGAAGATAACGTTAGAGGCTCTTCGTCTTCCACTGCTATTATCCAAACAGAAGGTTCAAGAGGAGAGAGAGTTCAAATGTATGAATATAGCTCTAACACAGAGAATGTGAGAGTTTCAGAAGAAGGAAGAAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGCAAGTGGGCAGCTGAAATCAGAGATCCTTTTAAAGCTGCCCGAGTTTGGTTGGGCACTTTCGACACTGCGGAGGCGGCAGCCCGGGCATACGACGAAGCTGCCCTCCGTTTTAGAGGCAACAAGGCCAAGCTTAATTTCCCTGAAAATGTCAGACTCCGACAACCACCTCCACCGGCACCGCCTCCGATGACGACGACCCATTTGCGAGGTTCAGGTTCTGCAACTACCCTTTTGTCCATTCCGACGTCGGCGGAGCCGTTTGTTCATTCGGAATCTCTTCACCACCACCACCATCTCATGAATCCTCAGACGGCGGCGGCGACCGGTGATTTTTATGGCTACCCGCAGTTTTCGGATTTCCCGATGAATTTTTATGATCAGACGGTTATGTCATCTTCAATGGCTCATCATTTACAGTCGTCGGCATCGCCATCAGCTTTGTCATCGTCGCCTTCTTCGACGGTGGCATCTTCCATTAGCTCTCAGCAAGAAGGATTGCCGTTTCCGGGTTGGGTCATACCGGAAAGCGGGTCCGAATACATACCATCAGCATGGTCATCAGCTTCGGGTCATAGTTCTTCTTCCTCTATATGA 1077 0.4995 MCFFLKVANPPNNSPNHNNVVDEHNTIVFPGMDRDREMSTMISALTHVVAGDIPDDSAGISGGGGDGDGRGGGGGGSVTLSSPSDLTTPSSSSSSYGGSSVLKRSREDNVRGSSSSTAIIQTEGSRGERVQMYEYSSNTENVRVSEEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRQPPPPAPPPMTTTHLRGSGSATTLLSIPTSAEPFVHSESLHHHHHLMNPQTAAATGDFYGYPQFSDFPMNFYDQTVMSSSMAHHLQSSASPSALSSSPSSTVASSISSQQEGLPFPGWVIPESGSEYIPSAWSSASGHSSSSSI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00656 358 ProSiteProfiles AP2/ERF domain profile. 151 208 IPR001471 GO:0003700|GO:0006355
Accr8g00656 358 PANTHER DNA-BINDING DOMAIN 114 316 IPR044808 GO:0003700|GO:0009873
Accr8g00656 358 FunFam Ethylene-responsive transcription factor 2 150 209 - -
Accr8g00656 358 PRINTS Ethylene responsive element binding protein signature 152 163 IPR001471 GO:0003700|GO:0006355
Accr8g00656 358 PRINTS Ethylene responsive element binding protein signature 174 190 IPR001471 GO:0003700|GO:0006355
Accr8g00656 358 CDD AP2 151 210 IPR001471 GO:0003700|GO:0006355
Accr8g00656 358 MobiDBLite consensus disorder prediction 303 331 - -
Accr8g00656 358 MobiDBLite consensus disorder prediction 303 326 - -
Accr8g00656 358 MobiDBLite consensus disorder prediction 210 232 - -
Accr8g00656 358 Gene3D AP2/ERF domain 150 210 IPR036955 GO:0003700|GO:0006355
Accr8g00656 358 MobiDBLite consensus disorder prediction 77 102 - -
Accr8g00656 358 MobiDBLite consensus disorder prediction 52 138 - -
Accr8g00656 358 SMART rav1_2 151 214 IPR001471 GO:0003700|GO:0006355
Accr8g00656 358 Pfam AP2 domain 151 200 IPR001471 GO:0003700|GO:0006355
Accr8g00656 358 SUPERFAMILY DNA-binding domain 151 209 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00656 Accr-Chr8 10505206 10506962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00656 159 260 AP2-EREBP Transcription Factor Family AT5G64750 63.889 1.14e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g00656 AP2 4.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00656 - - pcin:129309833 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00656 8 10505206 10506962 Accr8g00656 8 10505206 10506962 ECH