Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00650 ATGGACTTGGACGATTTCCGATCAATATTGGAGACGGCCGGTGTGGATGTGTGGATGTTCATCGACACCGCAATCGACGTCGCTTCCATTGAGTACAACAACGAGTTAAAGCGTCGAAGGGATGGAATCGTTCAGCGTCTCTTTGAAGCCACTTCAGCTCCTGGACTGTGTCGGAATTGCGAAGCGATTCGGTTTAAGTCCAATGGCCACCAAGTAAGCTCTCCAATTGAGAAACAGAGCACTCCTGAACTGAAAAGAGATGCCTCGCCGGTAACGCCGCACTCTAACGGTCAAGATGACGACGATTTCGGTCTTTATGGAGGCCTTCTTGATGATGAGCAAAAGAAGATTCAACAGATTAAAGAGCAACTTGAGGATCCTGACCAGCCTGAAGATTATGTGGTGGAGTTGCTACAGAATCTAGCGGACATGGATATTACATTCCAAGCGCTGAAGGAGACTGATATTGGGAGGCACGTTAATCGGTTGCGCAAGCATTCATCCAATGATGTTCGGAGATTGGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGATGAATGGGTGAAGGTAAATCAACCAGGCAATGTTGCTTCTGTCATAGCTAATGGAGATTCGCCTATGCAGAAAAACACCCCAAACGGGCACAGTCAGATTCCTGATTTTGCATACTCGCCTAATCCGCACTATGGGAGTTCTAGTTCAGAGCGGAACTATTCAGAAGCTGAACCAAAGCCAAAGACAATTTCTCGAAGAGTGCCACCAAAACCCGCAACCCCAGTGCCTATTCCTGCTTCTGCTTCTCAAAACGTATGA 819 0.4713 MDLDDFRSILETAGVDVWMFIDTAIDVASIEYNNELKRRRDGIVQRLFEATSAPGLCRNCEAIRFKSNGHQVSSPIEKQSTPELKRDASPVTPHSNGQDDDDFGLYGGLLDDEQKKIQQIKEQLEDPDQPEDYVVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKEIVDEWVKVNQPGNVASVIANGDSPMQKNTPNGHSQIPDFAYSPNPHYGSSSSERNYSEAEPKPKTISRRVPPKPATPVPIPASASQNV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00650 272 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 263 IPR044790 -
Accr8g00650 272 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 110 198 IPR035441 -
Accr8g00650 272 Pfam TFIIS helical bundle-like domain 137 186 IPR017923 -
Accr8g00650 272 MobiDBLite consensus disorder prediction 69 105 - -
Accr8g00650 272 CDD TFIIS_I 114 187 - -
Accr8g00650 272 MobiDBLite consensus disorder prediction 201 272 - -
Accr8g00650 272 MobiDBLite consensus disorder prediction 201 240 - -
Accr8g00650 272 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 115 194 IPR035441 -
Accr8g00650 272 ProSiteProfiles TFIIS N-terminal domain profile. 112 189 IPR017923 -
Accr8g00650 272 SMART TFS2_5 117 188 IPR003617 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00650 Accr-Chr8 10202165 10203579 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Accr8g00650 Med26 2.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00650 - - qsa:O6P43_030378 348.591