Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00649 ATGGACTTGGACGATTTCCGATCAATATTGGAGACGGCCGGTGTGGATGTGTGGATGTTCATCGACACCGCAATCGACGTCGCTTCCATTGAGTACAACAACGAGTTAAAGCGTCGAAGGGATGGAATCGTTCAGCGTCTCTTTGAAGCCACTTCAGCTCCTGGACTGTGTCGGAATTGCGAAGCGATTCGGTTTAAGTCCAATGGCCACCAAGTAAGCTCTCCAATTGAGAAACAGAGCACTCCTGAACTGAAAAGAGATGCCTCGCCGGTAACGCCGCACTCTAACGGTCAAGATGACGACGATTTCGGTCTTTATGGAGGCCTTCTTGATGATGAGCAAAAGAAGATTCAACAGATTAAAGAGCAACTTGAGGATCCTGACCAGCCTGAAGATTATGTGGTGGAGTTGCTACAGAATCTAGCGGACATGGATATTACATTCCAAGCGCTGAAGGAGACTGATATTGGGAGGCACGTTAATCGGTTGCGCAAGCATTCATCCAATGATGTTCGGAGATTGGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGATGAATGGGTGAAGGTAAATCAACCAGGCAATGTTGCTTCTGTCATAGCTAATGGAGATTCGCCTATGCAGAAAAACACCCCAAACGGGCACAGTCAGATTCCTGATTTTGCATACTCGCCTAATCCGCACTATGGGAGTTCTAGTTCAGAGCGGAACTATTCAGAAGCTGAACCAAAGCCAAAGACAATTTCTCGAAGAGTGCCACCAAAACCCGCAACCCCAGTGCCTATTCCTGCTTCTGCTTCTCAAAACAGAAAGAGAGAAGAGAGAGATAGCAATTTTGAAGCGGACAGACTTGCTTCAGCGAGAAGGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCCAAAAGACAAAGAACGATCCAGGTGATGGACCTCCATGAGATCCCTAGACCCAAGAAAAATGCCTTCTTTGCAAAGAACAAGTGTGGCGGCGGTTCTCAGGCTAGGCAATGGTAA 1023 0.4712 MDLDDFRSILETAGVDVWMFIDTAIDVASIEYNNELKRRRDGIVQRLFEATSAPGLCRNCEAIRFKSNGHQVSSPIEKQSTPELKRDASPVTPHSNGQDDDDFGLYGGLLDDEQKKIQQIKEQLEDPDQPEDYVVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKEIVDEWVKVNQPGNVASVIANGDSPMQKNTPNGHSQIPDFAYSPNPHYGSSSSERNYSEAEPKPKTISRRVPPKPATPVPIPASASQNRKREERDSNFEADRLASARRRLQENYKEAENAKRQRTIQVMDLHEIPRPKKNAFFAKNKCGGGSQARQW 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00649 340 Coils Coil 283 310 - -
Accr8g00649 340 MobiDBLite consensus disorder prediction 69 105 - -
Accr8g00649 340 CDD TFIIS_I 114 187 - -
Accr8g00649 340 MobiDBLite consensus disorder prediction 270 284 - -
Accr8g00649 340 MobiDBLite consensus disorder prediction 201 240 - -
Accr8g00649 340 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 340 IPR044790 -
Accr8g00649 340 ProSiteProfiles TFIIS N-terminal domain profile. 112 189 IPR017923 -
Accr8g00649 340 SMART TFS2_5 117 188 IPR003617 GO:0005634
Accr8g00649 340 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 110 198 IPR035441 -
Accr8g00649 340 MobiDBLite consensus disorder prediction 201 284 - -
Accr8g00649 340 Pfam TFIIS helical bundle-like domain 137 186 IPR017923 -
Accr8g00649 340 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 115 194 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00649 Accr-Chr8 10201551 10203579 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Accr8g00649 Med26 3.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00649 - - qsa:O6P43_030378 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00649 8 10201551 10203579 Accr8g00649 8 10201551 10203579 ECH