Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00633 ATGGCCGATGAAGAGCATACTCAACCCCTTGTTTTTGACAATGGAACCAGAATGGTGAAGGCTGGATTTGCTGGTGATGATACTCCTAGAACTGTGTTTCCCAGCATTGTTGGGCGACCCCAGCATCCTGGTATTACGGTAGGGATGGGTCAGAAAGATGCATATGTAGGTGATGAAGCCCAGTCAAAAAGAGGTCTTCTTACTTTGAAGTACCCCATTGAGAATGGTATGGTCACTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTTTACAACGAGCTTCGTGTTGCTCCTGAGGAGCACCCTGTGCTTCTCACTGAGGCTCCTCTCAACCCAAAAGCTAACAGAGAGAAAATGACTCAAGTCATGTTTGAGACCTTTAATGTCCCTGCCATGTATGTGGCCAATCAGGCTGTTCTCGCTCTATTTGCTAGTGGTCGTACAACTGGTATTGTTTTGGACTCTGGTGATGGTGTGACCCACACTGTGCCAATTTATGAGGGACATGCGCTTCCTCACGCTATTCTCCGTTTGAGTCTTGCTGGCAGTGTTTTAACTGATTCATTGATGGAGTTCCTGGATAAAAGAGGGTATAAGTTTACTACCTTTGCTGAGCGGGAAGTTGTCCGTGACATGAAGGAGAAACTTGCATATGTTGCTTTAGACTATGAGCTAGAGCTTGAGATTTCAAAGGTCAGCCCTTCATCAGTGGAGAAATACTATGAACTTCCTGATGGACAACTTATTAAAATTGGAGCCGAGAGATTCCGCTGCCCAGAAGTTTTGTTCCAGCCATCTATGATTGGAATGGAAGCTGCCGGAATCCACGAAATCACTTACAATTCTATCATGAAGTGTGATGTGGGTATCAGAAAGGATCTTTATCGCAACATTGTTCTAAGTGGTGGCTCAACCATGTTCAGGGGTATTGATGACCGAATGAGGGAGGAAATCACTTCACTTGCTCCAGGCATCATGAAGATTAAGGTGGTGGCTCCACCAGAGAGAAAGTACAGTGTCTGGATCGGAGGTTCATATCTTGCATCCCATAGCGCCTTCCAGCAGATGTGGATATCCAAGAGTGAATATGATGAGTCTGGTCCATCCATTGTCCACAGGATATGCTACTAA 1137 0.4529 MADEEHTQPLVFDNGTRMVKAGFAGDDTPRTVFPSIVGRPQHPGITVGMGQKDAYVGDEAQSKRGLLTLKYPIENGMVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQVMFETFNVPAMYVANQAVLALFASGRTTGIVLDSGDGVTHTVPIYEGHALPHAILRLSLAGSVLTDSLMEFLDKRGYKFTTFAEREVVRDMKEKLAYVALDYELELEISKVSPSSVEKYYELPDGQLIKIGAERFRCPEVLFQPSMIGMEAAGIHEITYNSIMKCDVGIRKDLYRNIVLSGGSTMFRGIDDRMREEITSLAPGIMKIKVVAPPERKYSVWIGGSYLASHSAFQQMWISKSEYDESGPSIVHRICY 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00633 378 FunFam Actin, alpha skeletal muscle 3 154 - -
Accr8g00633 378 SUPERFAMILY Actin-like ATPase domain 148 377 IPR043129 -
Accr8g00633 378 ProSitePatterns Actins signature 2. 359 367 IPR004001 -
Accr8g00633 378 SMART actin_3 7 378 IPR004000 -
Accr8g00633 378 PRINTS Actin signature 142 161 IPR004000 -
Accr8g00633 378 PRINTS Actin signature 239 255 IPR004000 -
Accr8g00633 378 PRINTS Actin signature 117 130 IPR004000 -
Accr8g00633 378 PRINTS Actin signature 63 85 IPR004000 -
Accr8g00633 378 PRINTS Actin signature 28 37 IPR004000 -
Accr8g00633 378 PRINTS Actin signature 51 62 IPR004000 -
Accr8g00633 378 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Accr8g00633 378 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Accr8g00633 378 FunFam Actin, alpha skeletal muscle 182 274 - -
Accr8g00633 378 PANTHER ACTIN 9 371 IPR004000 -
Accr8g00633 378 FunFam Major actin 262 341 - -
Accr8g00633 378 Gene3D Actin; Chain A, domain 4 182 274 - -
Accr8g00633 378 FunFam Putative actin-related protein 5 342 370 - -
Accr8g00633 378 Gene3D - 10 372 - -
Accr8g00633 378 Pfam Actin 5 377 IPR004000 -
Accr8g00633 378 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Accr8g00633 378 FunFam Actin, alpha skeletal muscle 36 73 - -
Accr8g00633 378 SUPERFAMILY Actin-like ATPase domain 7 155 IPR043129 -
Accr8g00633 378 Gene3D - 140 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00633 Accr-Chr8 10028191 10030635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00633 1 378 Cytoskeleton Gene Families AT5G09810 84.921 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00633 K10355 - fve:101313051 645.195