Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00595 ATGGGTACGAAAAAATTGATTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTCGTATACTTTCTGAAGAGGAAGGTTATGGGTAAAAAATTCCGGTATGATGTGATCGCAGAAGTAGAAATAAAAAAGTACGCTCCATGGGATCTTCCCGATAAATCTTACCTGACGACTGGAGATTTGAAATGGTACTTTTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGCGCTACGGAATTTGGGTACTGGAAAACTACTGGGAGGGATAGACCTGTTCATCATGAGAATCGAGTTGTGGGAATGATAAAAACCCTGATATTTCACAGAGGTAGAGCTCCTAAAGGTGATAGAACTAATTGGGTTATGCATGAATTTAGGCTCGAAGATCAGGTTCTGGCTGATAAAGGCATTCCTCAGGATTCCTATGTGCTTTGTAAGATTTTCCAAAAAGATGGTCCTGGTCCTAGGAATGGCGCCCAATATGGAAGGCCTTTCATTGATGAAGACTGGGATGATGATGAAGAAGAAATTGATGGTGTAGGATCTCTCCCATTAATTGGCGTACATGCTCCAATTACCATCGATCCTAATACACCTGGCAGTTCTACAGCAACTCATGGTCATCCCCCTGTTCCAGTTGTTGATGACATTACTAAATTGCTGGATTCTTTCACTGAGAATGACCCAGTGGCTATGATTGAAAATAACATTGAGAGGAATGATAATTCTGCTGTGGACAATGAAGCTGAAGTCCAACTTCGTTCGGATCCCAATGATATATTCAAGGACTTGGGAGACCTTGACAATACAAATCAAATCTATCATGCTGGTAGCTTGCCCTTGGACTTTTTTGATGATTTGGATTTCTTGGAGTTACGTGACCTGGACACCACCATTGGCCCACCACACTGA 930 0.4237 MGTKKLIPGFRFHPTDVELLVYFLKRKVMGKKFRYDVIAEVEIKKYAPWDLPDKSYLTTGDLKWYFFCPREKKYASGARMNRATEFGYWKTTGRDRPVHHENRVVGMIKTLIFHRGRAPKGDRTNWVMHEFRLEDQVLADKGIPQDSYVLCKIFQKDGPGPRNGAQYGRPFIDEDWDDDEEEIDGVGSLPLIGVHAPITIDPNTPGSSTATHGHPPVPVVDDITKLLDSFTENDPVAMIENNIERNDNSAVDNEAEVQLRSDPNDIFKDLGDLDNTNQIYHAGSLPLDFFDDLDFLELRDLDTTIGPPH 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00595 309 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Accr8g00595 309 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Accr8g00595 309 FunFam Nac domain-containing protein 86 15 159 - -
Accr8g00595 309 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Accr8g00595 309 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 207 - -
Accr8g00595 309 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00595 Accr-Chr8 9301557 9304360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00595 1 182 NAC Transcription Factor Family AT5G64060 68.132 1.50e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g00595 NAM 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00595 - - pvy:116121507 326.25