Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00592 ATGAATCTCTCCTTTCTTAATCGCTTCTCTGAGCGTCTTGTTGCTCCTCTCTACTCTACAACTCCCATCAGGAGCCAACGGACAGATGATATTGCTATTGAGGGTCGCAACCTGAATTTCTCGTTCCCCACAAGGCATGTGAAAGCTGTATCAATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGGAAATCTACCCTCTTAAAGATATTAGCTGGGCTCTTAAAGCCTACTTCAGGAACAGTGTACGTGAAAGGGCCTAAAAGTTTTGTTTTCCAAAATCCGGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTAACCTGTGATGAAGTGAGATCAAGGGTATCAAGACCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAGGTTCTGTTGTTGGATGAGCTCACAACGTTCTTACACGAAAGTGACCAGAAACAGGGGAGGACGATGACTTGGAATAAAGAGGAAGAAAAGACCAGAACCCATTCTTCTTTCTAG 645 0.4558 MNLSFLNRFSERLVAPLYSTTPIRSQRTDDIAIEGRNLNFSFPTRHVKAVSILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLKPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTCDEVRSRVSRPLHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLHESDQKQGRTMTWNKEEEKTRTHSSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00592 214 MobiDBLite consensus disorder prediction 194 214 - -
Accr8g00592 214 Pfam ABC transporter 53 185 IPR003439 GO:0005524
Accr8g00592 214 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 214 IPR003439 GO:0005524
Accr8g00592 214 CDD ABC_cobalt_CbiO_domain1 34 188 IPR015856 GO:0005524|GO:0016020|GO:0055085
Accr8g00592 214 Gene3D - 28 210 IPR027417 -
Accr8g00592 214 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 33 196 - -
Accr8g00592 214 SMART AAA_5 62 214 IPR003593 GO:0016887
Accr8g00592 214 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524|GO:0016887
Accr8g00592 214 MobiDBLite consensus disorder prediction 196 214 - -
Accr8g00592 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 194 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00592 Accr-Chr8 9253330 9255934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00592 20 194 Calmodulin-binding Proteins AT2G36910 30.052 1.45e-18 82.0