Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr8g00588 | ATGAATCTGTCCTATCTTGATCGCTTCTCTGGGCGTCTTGTTGCTCCTCTCTACTCTACAATTCCCATCAGGAGCCAACGGACAGATGATATTGCTATTGAGGGTCGCAACCTGAATTTCTCGTTCCCCACAAGGCATGTCAAAGCTGTACCGATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGGAAATCTACCCTCTTAAAGATATTAGCTGGGCTCTTAAATCCTACTTCAGGAACAGTGTACGTGAAAGGGCCAAAAAGTTTTGTTTTCCAAAATCCGGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTGAATCTAACCTCTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACTTTCTTAGACGAAAGTGACCAGGTTGGTGTAATCAAAGCAGTTAGGAACTCTCTGGATACCTCTGCAGGGGTTACAGCATTGTGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCGTCTACATGGAGGATGGGAAAGTTGTCATGTATGGAGATGCCGAAAGAATAAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA | 789 | 0.4487 | MNLSYLDRFSGRLVAPLYSTIPIRSQRTDDIAIEGRNLNFSFPTRHVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKLNLTSDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGAVYMEDGKVVMYGDAERIKSFIEARQSDYIKQINS | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr8g00588 | 262 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 24 | 249 | IPR027417 | - | |
Accr8g00588 | 262 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 10 | 33 | 247 | - | - | |
Accr8g00588 | 262 | SMART | AAA_5 | 62 | 225 | IPR003593 | GO:0016887 | |
Accr8g00588 | 262 | Gene3D | - | 28 | 261 | IPR027417 | - | |
Accr8g00588 | 262 | Pfam | ABC transporter | 53 | 185 | IPR003439 | GO:0005524 | |
Accr8g00588 | 262 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 33 | 258 | IPR003439 | GO:0005524 | |
Accr8g00588 | 262 | CDD | ABC_cobalt_CbiO_domain1 | 34 | 235 | IPR015856 | GO:0005524|GO:0016020|GO:0055085 | |
Accr8g00588 | 262 | ProSitePatterns | ABC transporters family signature. | 158 | 172 | IPR017871 | GO:0005524|GO:0016887 | |
Accr8g00588 | 262 | FunFam | ABC transporter I family member 10 | 29 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr8g00588 | Accr-Chr8 | 9167418 | 9169902 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr8g00588 | 33 | 261 | Calmodulin-binding Proteins | AT2G36910 | 29.600 | 2.73e-19 | 85.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr8g00588 | - | - | pcin:129309668 | 472.626 |