Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00588 ATGAATCTGTCCTATCTTGATCGCTTCTCTGGGCGTCTTGTTGCTCCTCTCTACTCTACAATTCCCATCAGGAGCCAACGGACAGATGATATTGCTATTGAGGGTCGCAACCTGAATTTCTCGTTCCCCACAAGGCATGTCAAAGCTGTACCGATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGGAAATCTACCCTCTTAAAGATATTAGCTGGGCTCTTAAATCCTACTTCAGGAACAGTGTACGTGAAAGGGCCAAAAAGTTTTGTTTTCCAAAATCCGGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTGAATCTAACCTCTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACTTTCTTAGACGAAAGTGACCAGGTTGGTGTAATCAAAGCAGTTAGGAACTCTCTGGATACCTCTGCAGGGGTTACAGCATTGTGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCGTCTACATGGAGGATGGGAAAGTTGTCATGTATGGAGATGCCGAAAGAATAAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 789 0.4487 MNLSYLDRFSGRLVAPLYSTIPIRSQRTDDIAIEGRNLNFSFPTRHVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKLNLTSDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGAVYMEDGKVVMYGDAERIKSFIEARQSDYIKQINS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00588 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 249 IPR027417 -
Accr8g00588 262 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 33 247 - -
Accr8g00588 262 SMART AAA_5 62 225 IPR003593 GO:0016887
Accr8g00588 262 Gene3D - 28 261 IPR027417 -
Accr8g00588 262 Pfam ABC transporter 53 185 IPR003439 GO:0005524
Accr8g00588 262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 258 IPR003439 GO:0005524
Accr8g00588 262 CDD ABC_cobalt_CbiO_domain1 34 235 IPR015856 GO:0005524|GO:0016020|GO:0055085
Accr8g00588 262 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524|GO:0016887
Accr8g00588 262 FunFam ABC transporter I family member 10 29 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00588 Accr-Chr8 9167418 9169902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00588 33 261 Calmodulin-binding Proteins AT2G36910 29.600 2.73e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00588 - - pcin:129309668 472.626