Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00574 ATGGGAAGTGAAAGGGTGAATCTTCCACCTGGCTTTATCTTCTCTCCAACAGATGAAGAACTAGTCCTTCACTTTCTTTATCCCAAGTCTTTCCTTCTACCCTTCCATCCCAATATCATCCCTGACCTTGATCTCTCTCTCTTTCACCCTTCCCAACTCAACGGGAAGGCGTTGTTAAGTGGAAACCAATACTATTTCTTCACAAAGTATAAGAAAAAAAGAGGGACAGAAAGCGGGTATTGGAAGAAGGAAATAGGTGTGACTGAGTCAGTAGTCTCAGCTGATGCAGGCAAGAAAGTTGGCATCAAGAAATATTTGGTGTTCAACAATGGAGAAGCTCCTCATGGTACTGAAACCAGCTGGCTCATGCAAGAGTATCATCTTTGTACTTGTGGGTTTAACACTCGAGGAACCCAAAAACCTGATAAAACTAAGTGGGTACTGTGCCGAGTCTATGAAAAGAAGAGAGATTCTGAAGATGATGAAGGTGGGAGTACAGAGCTTTCATGTATGGATCAACTGTACATGTCGACGTTGGGTGATGAAGAAGAAGAAGTTAGCTTTCCCTAA 570 0.4263 MGSERVNLPPGFIFSPTDEELVLHFLYPKSFLLPFHPNIIPDLDLSLFHPSQLNGKALLSGNQYYFFTKYKKKRGTESGYWKKEIGVTESVVSADAGKKVGIKKYLVFNNGEAPHGTETSWLMQEYHLCTCGFNTRGTQKPDKTKWVLCRVYEKKRDSEDDEGGSTELSCMDQLYMSTLGDEEEEVSFP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00574 189 PANTHER NAC TRANSCRIPTION FACTOR 56 8 161 - -
Accr8g00574 189 Pfam No apical meristem (NAM) protein 9 128 IPR003441 GO:0003677|GO:0006355
Accr8g00574 189 ProSiteProfiles NAC domain profile. 8 154 IPR003441 GO:0003677|GO:0006355
Accr8g00574 189 SUPERFAMILY NAC domain 4 154 IPR036093 GO:0003677|GO:0006355
Accr8g00574 189 Gene3D NAC domain 17 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00574 Accr-Chr8 9037963 9038774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00574 4 157 NAC Transcription Factor Family AT5G39610 39.521 6.42e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g00574 NAM 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00574 - - adu:107470472 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00574 8 9037963 9038774 Accr8g00574 8 9037963 9038774 ECH