Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00570 ATGAAGAATCAAGGGTGTGAGGTTGAAGCCATAGGCATCAACTATAAGATCTGCACACAGAAAACAGAGCGCCCTTTCAAAATCTTTGGCAAATTTCCTAAACAAATCGACCAAGAAAAAGAAGAAGAAGAAGGAGCAAAACCTGAACAAGCATGCAGGGGTGGAGTAAGGCATGTCCTCAAATATGTGAGCTTTCGAGCCAAGCCACAAGAAATTCTCGCCATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTAGAGATTCTTGCTGGTAAAGTATCCCCACAAAGTGGCTCCATCTTGGTGAACCAGAAACCTGTAGATAATGCTCTGTTCAGGAAGACTTCAGGGTATGTTACACAAAATGATATTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTTAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGATCAACTCTGCTGCAGAGTCAAGTCACTGATTCAGGAGCTAGGACTCAGCCATGTTGCTAAGACCCGAATTGGAGATAATAGGACCCGTGGGATCTCCGGTGGGGAAAAACGACGAGTTTCAATTGGAGTTGAAGTTATACACGACCCCAAAGTGGTGATTCTGGACGAACCAACTTCTGGGCTTGACAGTACATCTGCTCTGCAGATCATTGAAATGCTAAAGGTCATGGCTGATTCAAGGGGCCGAACTATAATCCTAAGCATCCATCAACCTGGGTTCAGAATTGTAAAATTGCTCAATTCTATATTGTTGTTGGCCAGCGGCTCTGTTTTACATCATGGAACTGCGGATTTGTTGGGTGTCAATCTAAGATTAATGGGTTTAGAGCTTCCCCTTCATGTTAATGTAGTTGAATTTGCCATTGAGTCCATTGAAAAACAGAAAAAGTGTAAGCGATTTCAAATTCAAATGCCTACACTATTGCCAGCAACAATGCAGCAAAAGAAAAGTGATGTTCAAGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAGCAGCTCTTTCAACAATCAAAGGTAATTGATGAAGAAACCATCAACGCTGGAATGGATTTCACCTGTGATTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGCCACAGGTTCTTCAAAAACATTTTTCGTTCAAAGGAGCTCTTCGCATGTAGGACGATCCAGATGCTGATTTCGGGATTAGTTTTGGGCTCCATCTTTTGTAACCTCAAGGATGGTCTAGAGGGTGCTGAAGAAAGGGTAGGTCTATTTGCCTTCATATTATCGTTCTTACTATCAAGCACCATAGAAGCTCTGCCAATTTTCTTGCAGGAAAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCCTATGCAATTGCTAATGGCCTTGTTTACTTGCCATTCCTACTCATCCTTGCCATTTTATTCACAGTACCCTTATACTGGCTTGTTGGTCTTAACCGGAATTTCACAGCTTTTTTGCACTTCGTGTGGCTGATTTGGTTAGTTCTTTACACAGCAAACTCAGTTGTGGTGTGTTTCAGTGCTCTAGTGCCTAACTTTATTGTGGGAAACTCACTCATCGGGGGAGTCATCGGGTCATTCTTCTTGTTCTCTGGTTACTTCATATCAAAACAAGAAATCCCAAAGTACTGGATTTTCATGCATTATATTTCACTGTTTAAGTATCCCTTTGAAGGGCTTCTGGTTAACGAGTTCTCCAACTCAGGTAAGTGCTTACAGTACATGTTTGGGGAGTGTGTGGTGACTGGGGAAGATGTGCTTAAAGAGGAAGGTTATGGGGGCGAAAGTAGTAAATCGAAGAATATTGGGGTCATGGTGTGCTTCATCCTGTTTTACAGGTTGCTTTCCTATATAATTCTTAGATATAGATGCTCGCAGAGGACTTCCTAA 1914 0.4206 MKNQGCEVEAIGINYKICTQKTERPFKIFGKFPKQIDQEKEEEEGAKPEQACRGGVRHVLKYVSFRAKPQEILAIVGPSGAGKSSLLEILAGKVSPQSGSILVNQKPVDNALFRKTSGYVTQNDILFPLLTVEETLMFSAKLRLKLPQDQLCCRVKSLIQELGLSHVAKTRIGDNRTRGISGGEKRRVSIGVEVIHDPKVVILDEPTSGLDSTSALQIIEMLKVMADSRGRTIILSIHQPGFRIVKLLNSILLLASGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIEKQKKCKRFQIQMPTLLPATMQQKKSDVQGESRSGKFTLQQLFQQSKVIDEETINAGMDFTCDFANSRLKETMILSHRFFKNIFRSKELFACRTIQMLISGLVLGSIFCNLKDGLEGAEERVGLFAFILSFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNRNFTAFLHFVWLIWLVLYTANSVVVCFSALVPNFIVGNSLIGGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLVNEFSNSGKCLQYMFGECVVTGEDVLKEEGYGGESSKSKNIGVMVCFILFYRLLSYIILRYRCSQRTS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00570 637 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 622 - -
Accr8g00570 637 Pfam ABC transporter 60 208 IPR003439 GO:0005524
Accr8g00570 637 Gene3D - 50 320 IPR027417 -
Accr8g00570 637 SMART AAA_5 69 266 IPR003593 GO:0016887
Accr8g00570 637 FunFam ABC transporter G family member 5 44 305 - -
Accr8g00570 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 281 IPR003439 GO:0005524
Accr8g00570 637 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Accr8g00570 637 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Accr8g00570 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 265 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00570 Accr-Chr8 8998415 9000328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00570 71 300 Calmodulin-binding Proteins AT2G36910 26.141 6.16e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00570 K05681 - gmx:102665974 1011.13