Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00569 ATGGAAGCAATGAAGAATCAAGGGTGTGAGGTTGAAGCCATAGGCATCAACTATAAGATCTGCACACAGAAAACAGAGCGCCCTTTCAAAATCTTTGGCAAATTTCCTAAACAAATCGACCAAGAAAAAGAAGAAGAAGAAGGAGCAAAACCTGAACAAGCATGCAGGGGTGGAGTAAGGCATGTCCTCAAATATGTGAGCTTTCGAGCCAAGCCACAAGAAATTCTCGCCATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTAGAGATTCTTGCTGGTAAAGTATCCCCACAAAGTGGCTCCATCTTGGTGAACCAGAAACCTGTAGATAATGCTCTGTTCAGGAAGACTTCAGGGTATGTTACACAAAATGATATTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTTAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGATCAACTCTGCTGCAGAGTCAAGTCACTGATTCAGGAGCTAGGACTCAGCCATGTTGCTAAGACCCGAATTGGAGATAATAGGACCCGTGGGATCTCCGGTGGGGAAAAACGACGAGTTTCAATTGGAGTTGAAGTTATACACGACCCCAAAGTGGTGATTCTGGACGAACCAACTTCTGGGCTTGACAGTACATCTGCTCTGCAGATCATTGAAATGCTAAAGGTCATGGCTGATTCAAGGGGCCGAACTATAATCCTAAGCATCCATCAACCTGGGTTCAGAATTGTAAAATTGCTCAATTCTATATTGTTGTTGGCCAGCGGCTCTGTTTTACATCATGGAACTGCGGATTTGTTGGGTGTCAATCTAAGATTAATGGGTTTAGAGCTTCCCCTTCATGTTAATGTAGTTGAATTTGCCATTGAGTCCATTGAAAAACAGAAAAAGTGTAAGCGATTTCAAATTCAAATGCCTACACTATTGCCAGCAACAATGCAGCAAAAGAAAAGTGATGTTCAAGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAGCAGCTCTTTCAACAATCAAAGGTAATTGATGAAGAAACCATCAACGCTGGAATGGATTTCACCTGTGATTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGCCACAGGTTCTTCAAAAACATTTTTCGTTCAAAGGAGCTCTTCGCATGTAGGACGATCCAGATGCTGATTTCGGGATTAGTTTTGGGCTCCATCTTTTGTAACCTCAAGGATGGTCTAGAGGGTGCTGAAGAAAGGGTAGGTCTATTTGCCTTCATATTATCGTTCTTACTATCAAGCACCATAGAAGCTCTGCCAATTTTCTTGCAGGAAAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCCTATGCAATTGCTAATGGCCTTGTTTACTTGCCATTCCTACTCATCCTTGCCATTTTATTCACAGTACCCTTATACTGGCTTGTTGGTCTTAACCGGAATTTCACAGCTTTTTTGCACTTCGTGTGGCTGATTTGGTTAGTTCTTTACACAGCAAACTCAGTTGTGGTGTGTTTCAGTGCTCTAGTGCCTAACTTTATTGTGGGAAACTCACTCATCGGGGGAGTCATCGGGTCATTCTTCTTGTTCTCTGGTTACTTCATATCAAAACAAGAAATCCCAAAGTACTGGATTTTCATGCATTATATTTCACTGTTTAAGTATCCCTTTGAAGGGCTTCTGGTTAACGAGTTCTCCAACTCAGGTAAGTGCTTACAGTACATGTTTGGGGAGTGTGTGGTGACTGGGGAAGATGTGCTTAAAGAGGAAGGTTATGGGGGCGAAAGTAGTAAATCGAAGAATATTGGGGTCATGGTGTGCTTCATCCTGTTTTACAGGTTGCTTTCCTATATAATTCTTAGATATAGATGCTCGCAGAGGACTTCCTAA 1923 0.4207 MEAMKNQGCEVEAIGINYKICTQKTERPFKIFGKFPKQIDQEKEEEEGAKPEQACRGGVRHVLKYVSFRAKPQEILAIVGPSGAGKSSLLEILAGKVSPQSGSILVNQKPVDNALFRKTSGYVTQNDILFPLLTVEETLMFSAKLRLKLPQDQLCCRVKSLIQELGLSHVAKTRIGDNRTRGISGGEKRRVSIGVEVIHDPKVVILDEPTSGLDSTSALQIIEMLKVMADSRGRTIILSIHQPGFRIVKLLNSILLLASGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIEKQKKCKRFQIQMPTLLPATMQQKKSDVQGESRSGKFTLQQLFQQSKVIDEETINAGMDFTCDFANSRLKETMILSHRFFKNIFRSKELFACRTIQMLISGLVLGSIFCNLKDGLEGAEERVGLFAFILSFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNRNFTAFLHFVWLIWLVLYTANSVVVCFSALVPNFIVGNSLIGGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLVNEFSNSGKCLQYMFGECVVTGEDVLKEEGYGGESSKSKNIGVMVCFILFYRLLSYIILRYRCSQRTS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00569 640 SMART AAA_5 72 269 IPR003593 GO:0016887
Accr8g00569 640 FunFam ABC transporter G family member 5 47 308 - -
Accr8g00569 640 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Accr8g00569 640 Pfam ABC-2 type transporter 368 576 IPR013525 GO:0016020|GO:0140359
Accr8g00569 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 268 IPR027417 -
Accr8g00569 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 625 - -
Accr8g00569 640 Pfam ABC transporter 63 211 IPR003439 GO:0005524
Accr8g00569 640 Gene3D - 53 323 IPR027417 -
Accr8g00569 640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 284 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00569 Accr-Chr8 8998415 9000337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00569 74 303 Calmodulin-binding Proteins AT2G36910 26.141 6.16e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00569 K05681 - gmx:102665974 1011.13