Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00551 ATGGAAAATGAGTTACTCAAGAAATCACAAGCTCTTCTGAGCCTGAGAAAAAGGAAACGAATTGGTTCAACAATGGCAAAGAGCCATTTTCGGTCAAAAGAAGACATGGGTGCTATTAAGAAATCCAATCTGAAGCCAAGATCTTCATCCACTCTTCTAAAGGTACAGAGAGGCAGAGTACAAAAGAATGTTACAAGTAAGAATGTAGAAAGAGCTTTGAGGCTAAAGAGATCAACCATTGATTATGAGTCTCATGCTTTTGAGCGAGCGAAAGAGGTTCAAGCAAATCTATCCCATGAATTTCCAAGCTTTATCAAGTACATGCTCCCATCACATGTTTCTGGTGGATTTTGGCTGGGTTTTCCTAAACGTTTCTGTGAAATGCATTTGCCCAAGGTTGATACTATGCTTGTTTTGGAAGATGAGAATGGAAGAGAATATGAAACAAAATATCTTACCGAGAAGGTGGGCTTAAGTGGTGGATGGAGAGGCTTTTCCATTGCTCACAATTTACTTGAGGGACATGTTTTAGTTTTCCATTTAATCCAGTCTCGCAAGTTCAAGGTGTTTATCATAAGATCTCATGGGTCAAACGAAGTGGATGTTGCTCTCGGCCTTCTATATTTAGATGGTTGCATGAAGCAACATGATTCTAATATTGCTGAAGAAAACGATCCAAGCAATGGCACAATGATGTGTGATGCTGACGTATCGCCATCAGATCAACATGAAAATACTAGTGATCTAGATGAACATCTTGGCTATGAAGTTTTGTATGGGATTAAATTATCAGAATCTTCAATCACTTTCGAAGAAGTCACTAGTATTGAGAAATTCAGCATTGTGGTTAATGGTCTGGAACTTGACTCAGAACTATCCAAACACCTCAAGACCAAGTACTATGAGCTTTGTTGTAGTCAAGGAATGTTTCTTCATGAGCACGTCCTTGAAGGTCAGAACTGTAAACTTGTGGTTGGAATGATATGTGAGACCATTAATATTGCTGATGCCATTAGAGCCAGCAAGATCACAACCTCCTTGGATAGTTTTGAAGTGTGGTATAAATCTTTAAAAGGTCTTGAAATCTTCGGCATGAATGTTAGTTTCTTGCTTTCTAGGCTAGAACAACTCATGAGTTTAGCTTCAAAATCCAAGAGGTACACGGAGACAAGAATTACACGAGATAAAGCTAAAGAGGAAAAGGAAGTTCTTGAACAGAAGCTTGAGGAAGTGAAAGAGACCATTAGTAGACTTGATGTCGAGCTTGACACCCAAAATTTGAACCCTGAGAGGTTGGAGGCTGAGTTTGAAGATCTGGCTAATACTCCTTGGTGA 1335 0.3925 MENELLKKSQALLSLRKRKRIGSTMAKSHFRSKEDMGAIKKSNLKPRSSSTLLKVQRGRVQKNVTSKNVERALRLKRSTIDYESHAFERAKEVQANLSHEFPSFIKYMLPSHVSGGFWLGFPKRFCEMHLPKVDTMLVLEDENGREYETKYLTEKVGLSGGWRGFSIAHNLLEGHVLVFHLIQSRKFKVFIIRSHGSNEVDVALGLLYLDGCMKQHDSNIAEENDPSNGTMMCDADVSPSDQHENTSDLDEHLGYEVLYGIKLSESSITFEEVTSIEKFSIVVNGLELDSELSKHLKTKYYELCCSQGMFLHEHVLEGQNCKLVVGMICETINIADAIRASKITTSLDSFEVWYKSLKGLEIFGMNVSFLLSRLEQLMSLASKSKRYTETRITRDKAKEEKEVLEQKLEEVKETISRLDVELDTQNLNPERLEAEFEDLANTPW 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00551 444 Gene3D - 81 195 IPR015300 -
Accr8g00551 444 Coils Coil 387 428 - -
Accr8g00551 444 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 70 196 IPR044837 -
Accr8g00551 444 SUPERFAMILY DNA-binding pseudobarrel domain 97 195 IPR015300 -
Accr8g00551 444 SMART B3_2 104 196 IPR003340 GO:0003677
Accr8g00551 444 MobiDBLite consensus disorder prediction 27 41 - -
Accr8g00551 444 MobiDBLite consensus disorder prediction 23 48 - -
Accr8g00551 444 Pfam B3 DNA binding domain 104 191 IPR003340 GO:0003677
Accr8g00551 444 CDD B3_DNA 102 193 IPR003340 GO:0003677
Accr8g00551 444 ProSiteProfiles B3 DNA-binding domain profile. 104 195 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00551 Accr-Chr8 8627131 8631221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00551 78 193 B3 DNA Binding Superfamily AT3G19184 52.586 2.05e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr8g00551 B3 3.9e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00551 - - pcin:129286163 478.404