Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00545 ATGAAGCTGACCGGAGACGGTATGGCGTCCGAAGAAGGCACGAGTGACTGCGACGGTGGTCGGACGGTCGTCGTTGGGGTGAAGTTAGATCCTCGGAGTAGAGAATTGCTCACTTGGGCCCTAGTCAAAGTGGCGGAGCCTGGTGACCATGTCATTGCTCTTCACGTTCTCGGCAATATACCTGCGGGTACAGGATCGCTCCTCTCTTTTGTAAATACTTTTGAATCTGTTCTCGCCGTTTATGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTGAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTATTATACGGGAGGCGAAATCGTTTGGTGCGTCAACTGTAATTGTGGGGACTTCTAAAACGCATCACACAATCCGGTCATCGGCATTCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCGGTTGACAATGGCAAAATTGCGTTCCACAGAGAGGCTACAAAAATATGCGGTGCTCAAGTAAAACTAAATGAAGGCCCAGCTTTGTTAACAAAATCCTTCAAGCTTGGTACAAAGACAAATGTTATGAACTGTGAATGTTGTGAGCGGGTGCTAGCACTTCCAGAGAGTACTGCTATTGAAGATGTGCCTGATGATCAGGAAAAGAAAGATTCACTAGCTTTAGTACCGCTTCAGAAAATTGGCGATGGTCAAGGTTGTGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGCTGGTCTGTCCTTCGCCAGAGTGGTGCCATTGTGCCATTCAGATCTACTGCTAACTCTGGCTTCAGCAACTTTCAAGAAGAATTGTCCAGCTTACAGGAGAAGTACTCATCTTCATGCAGAGTGTATACTTTCCAAGAACTTACTTCTGCAACCGCTAACTTCTCGCCTGAAAATCTGGTTGGTAAAGGAGGCAGTAGCTATGTGTATAAAGGATCTCTTCCAGATGGCAAGGAGGTAGCTGTGAAAATTTTGAAGCCATCAGAAGATGTGGTCAGAGAGTTTCTTTTGGAAATTGAGATCATCACAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGATGACAATAATTTGCTTTTGGTCTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTTGGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTGCACAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCTGATTTTGGACTAGCCAGTTGGGGTTCTTCATCATCCCATGTTACTTTTACTGATGTGGCGGGAACCTTCGGATACCTGGCTCCTGAGTACTTTATGCATGGTAGGGTAACTGACAGAATTGATACATATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCTAGCAGGAAGCCCATCAACAACGAATCCCCTAAGGGGCAGGAGAGCCTTGTGATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCCTTGGCGATCCTGATCATGGGCTGATTGACAGAATGGTTTTGGCTGCTATCCTTTGCCTCCGACGATCACCTAAATGTCGACCTCAAATCAGCATCATATTGAAACTTCTGCAAGGTGATGAGGAAGTCACAAGTTGGGCAAAACAAGAAGTTGGTGCACCAGAAGAACTTGACGCTTTTGATGGGGGACCAAATAATATCCAGTCCCATCTGAACCTTGCTTTGCTGGACCTGGACGATGATACAGCTTCTGTAAGTAGCTCTGAGCAGAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCGTCAAGTTTTGATTAA 1938 0.4474 MKLTGDGMASEEGTSDCDGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVLGNIPAGTGSLLSFVNTFESVLAVYEGFCNLKQVDLKLKVCRGESARKLIIREAKSFGASTVIVGTSKTHHTIRSSAFVAKYCAKKLPKCISVFAVDNGKIAFHREATKICGAQVKLNEGPALLTKSFKLGTKTNVMNCECCERVLALPESTAIEDVPDDQEKKDSLALVPLQKIGDGQGCATVVQESNQSKHGWSVLRQSGAIVPFRSTANSGFSNFQEELSSLQEKYSSSCRVYTFQELTSATANFSPENLVGKGGSSYVYKGSLPDGKEVAVKILKPSEDVVREFLLEIEIITTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFGWQERYKVAVGVAEALDFLHNGCAQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTFTDVAGTFGYLAPEYFMHGRVTDRIDTYAFGVVLLELLSSRKPINNESPKGQESLVMWARPILKDGKLSQLLDSSLGDPDHGLIDRMVLAAILCLRRSPKCRPQISIILKLLQGDEEVTSWAKQEVGAPEELDAFDGGPNNIQSHLNLALLDLDDDTASVSSSEQSVSLEDYLQGRWSRSSSFD 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00545 645 SUPERFAMILY Protein kinase-like (PK-like) 284 573 IPR011009 -
Accr8g00545 645 Gene3D Phosphorylase Kinase; domain 1 266 378 - -
Accr8g00545 645 ProSiteProfiles Protein kinase domain profile. 304 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00545 645 Pfam Protein kinase domain 307 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00545 645 FunFam Putative receptor-like serine/threonine-protein kinase 379 589 - -
Accr8g00545 645 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Accr8g00545 645 Gene3D Transferase(Phosphotransferase) domain 1 379 589 - -
Accr8g00545 645 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Accr8g00545 645 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00545 645 Gene3D HUPs 20 153 IPR014729 -
Accr8g00545 645 CDD USP_Like 22 147 - -
Accr8g00545 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Accr8g00545 645 Pfam Universal stress protein family 21 145 IPR006016 -
Accr8g00545 645 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 273 378 - -
Accr8g00545 645 PANTHER OS08G0249100 PROTEIN 73 586 IPR046958 -
Accr8g00545 645 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00545 Accr-Chr8 8534243 8537459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00545 292 644 Trihelix Transcription Factor Family AT1G70460 40.496 6.65e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr8g00545 Pkinase 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00545 - - gmx:100815722 823.928