Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00544 ATGAAGCTGACCGGAGACGGTATGGCGTCCGAAGAAGGCACGAGTGACTGCGACGGTGGTCGGACGGTCGTCGTTGGGGTGAAGTTAGATCCTCGGAGTAGAGAATTGCTCACTTGGGCCCTAGTCAAAGTGGCGGAGCCTGGTGACCATGTCATTGCTCTTCACGTTCTCGGCAATATACCTGCGGGTACAGGATCGCTCCTCTCTTTTGTAAATACTTTTGAATCTGTTCTCGCCGTTTATGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTGAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTATTATACGGGAGGCGAAATCGTTTGGTGCGTCAACTGTAATTGTGGGGACTTCTAAAACGCATCACACAATCCGGTCATCGGCATTCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCGGTTGACAATGGCAAAATTGCGTTCCACAGAGAGGCTACAAAAATATGCGGTGCTCAAGTAAAACTAAATGAAGGCCCAGCTTTGTTAACAAAATCCTTCAAGCTTGGTACAAAGACAAATGTTATGAACTGTGAATGTTGTGAGCGGGTGCTAGCACTTCCAGAGAGTACTGCTATTGAAGATGTGCCTGATGATCAGGAAAAGAAAGATTCACTAGCTTTAGTACCGCTTCAGAAAATTGGCGATGGTCAAGGTTGTGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGCTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAAAAAGCATGTGCAGAAACCGTATGTGAGCAATCCATATGTTTTTCAACGGGCAGTTAAAACCAGCTGGCATTCATCAGCTGTAGTCCATCCAGATCTTAAACAAATTAATATTGACAAAAATGACAATACTACCCTTGATGGGCAGAGTGGTGCCATTGTGCCATTCAGATCTACTGCTAACTCTGGCTTCAGCAACTTTCAAGAAGAATTGTCCAGCTTACAGGAGAAGTACTCATCTTCATGCAGAGTGTATACTTTCCAAGAACTTACTTCTGCAACCGCTAACTTCTCGCCTGAAAATCTGGTTGGTAAAGGAGGCAGTAGCTATGTGTATAAAGGATCTCTTCCAGATGGCAAGGAGGTAGCTGTGAAAATTTTGAAGCCATCAGAAGATGTGGTCAGAGAGTTTCTTTTGGAAATTGAGATCATCACAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGATGACAATAATTTGCTTTTGGTCTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTTGGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTGCACAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCTGATTTTGGACTAGCCAGTTGGGGTTCTTCATCATCCCATGTTACTTTTACTGATGTGGCGGGAACCTTCGGATACCTGGCTCCTGAGTACTTTATGCATGGTAGGGTAACTGACAGAATTGATACATATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCTAGCAGGAAGCCCATCAACAACGAATCCCCTAAGGGGCAGGAGAGCCTTGTGATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCCTTGGCGATCCTGATCATGGGCTGATTGACAGAATGGTTTTGGCTGCTATCCTTTGCCTCCGACGATCACCTAAATGTCGACCTCAAATCAGCATCATATTGAAACTTCTGCAAGGTGATGAGGAAGTCACAAGTTGGGCAAAACAAGAAGTTGGTGCACCAGAAGAACTTGACGCTTTTGATGGGGGACCAAATAATATCCAGTCCCATCTGAACCTTGCTTTGCTGGACCTGGACGATGATACAGCTTCTGTAAGTAGCTCTGAGCAGAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCGTCAAGTTTTGATTAA 2097 0.4435 MKLTGDGMASEEGTSDCDGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVLGNIPAGTGSLLSFVNTFESVLAVYEGFCNLKQVDLKLKVCRGESARKLIIREAKSFGASTVIVGTSKTHHTIRSSAFVAKYCAKKLPKCISVFAVDNGKIAFHREATKICGAQVKLNEGPALLTKSFKLGTKTNVMNCECCERVLALPESTAIEDVPDDQEKKDSLALVPLQKIGDGQGCATVVQESNQSKHGWSVLRQVFLPKKHVQKPYVSNPYVFQRAVKTSWHSSAVVHPDLKQINIDKNDNTTLDGQSGAIVPFRSTANSGFSNFQEELSSLQEKYSSSCRVYTFQELTSATANFSPENLVGKGGSSYVYKGSLPDGKEVAVKILKPSEDVVREFLLEIEIITTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFGWQERYKVAVGVAEALDFLHNGCAQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTFTDVAGTFGYLAPEYFMHGRVTDRIDTYAFGVVLLELLSSRKPINNESPKGQESLVMWARPILKDGKLSQLLDSSLGDPDHGLIDRMVLAAILCLRRSPKCRPQISIILKLLQGDEEVTSWAKQEVGAPEELDAFDGGPNNIQSHLNLALLDLDDDTASVSSSEQSVSLEDYLQGRWSRSSSFD 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00544 698 Gene3D Phosphorylase Kinase; domain 1 318 431 - -
Accr8g00544 698 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Accr8g00544 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Accr8g00544 698 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 125 - -
Accr8g00544 698 Gene3D HUPs 20 153 IPR014729 -
Accr8g00544 698 Gene3D Transferase(Phosphotransferase) domain 1 432 642 - -
Accr8g00544 698 Pfam Universal stress protein family 21 145 IPR006016 -
Accr8g00544 698 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 326 431 - -
Accr8g00544 698 Pfam Protein kinase domain 360 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00544 698 SUPERFAMILY Protein kinase-like (PK-like) 337 626 IPR011009 -
Accr8g00544 698 ProSiteProfiles Protein kinase domain profile. 357 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00544 698 PANTHER OS08G0249100 PROTEIN 73 639 IPR046958 -
Accr8g00544 698 CDD USP_Like 22 147 - -
Accr8g00544 698 FunFam Putative receptor-like serine/threonine-protein kinase 432 642 - -
Accr8g00544 698 SMART serkin_6 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00544 698 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00544 Accr-Chr8 8534243 8537459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00544 345 697 Trihelix Transcription Factor Family AT1G70460 40.496 1.80e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr8g00544 Pkinase 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00544 - - gmx:100815722 902.508