Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00525 ATGCTGCAACAACTTCATCAACAACAAGGATACACTGATAGAACCAAAATTTTCACCGAAGACGAGCTCAAAATTGCCACAAACAACTTTGATGAGAGCAGAATTCTCGGTCGTGGAGGACAAGGCACGGTTTACAAGGGCATATTACCAGATAACTCAATTGTTGCCATTAAAAGGTCCAGAGTAGGAGGTGACTCAAGACAAGTTAAGGATTTTGTCAATGAAGTGACTGTACTTTCCCAAATCAACCATAGGAATGTGGTTAAACTTTTTGGATGTTGTCTTGAAACTGAAGTTCCCTTGTTGGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGACCATATAGACACACTAAAGAATGAGCATTCTCTTTCGTGGGAGACTCGATTAAGGATAGCTGCAGAAATAGCCGAGGCCATTTCATATTTACACTCTTCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAAATCACAATCATATAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTCAATGAAAGTCAAGTTTCTACTGTAGTTCAAGGGACATTAGGATATCTGGACCCAGAGTACCTACTTACAGGTGAACTAAATGAGAAAAGCGATGTATATAGCTTTGGGGTTGTGCTTGTGGAGCTAATCACTGGGAATAAAGCGGTTGAATTCAATAGGTCAGGACAAAGAAATTTGGCTATGTACTTTGCATCTTCAATGAAAGAAGACAACTTATGGCAGATTCTTGACAATCGAGTGTTAGATCAGAAGAATGCAGAGCAATTAAAGGAGGTTGCTTTCTTAGCAAGAAGGTGCATTAGAATGAATGGGGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAAGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAAAAGGAGGGGATATGATGTCTGAAGAATGTAAATGCTTGCTTGGTCATGTGGCTGATGGATATGAGAATGCTAGTGCTAGCACTTCAGCTGCCTATGATAGCATCCAGAAACAGTTAGCATTTGAGATAGAAGATGGGCGATGA 1080 0.3963 MLQQLHQQQGYTDRTKIFTEDELKIATNNFDESRILGRGGQGTVYKGILPDNSIVAIKRSRVGGDSRQVKDFVNEVTVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDTLKNEHSLSWETRLRIAAEIAEAISYLHSSASIPIIHRDIKSANILLNHNHIAKVSDFGASRLVPLNESQVSTVVQGTLGYLDPEYLLTGELNEKSDVYSFGVVLVELITGNKAVEFNRSGQRNLAMYFASSMKEDNLWQILDNRVLDQKNAEQLKEVAFLARRCIRMNGEERPTMKEVATELEGLIAMKKHPWVKGGDMMSEECKCLLGHVADGYENASASTSAAYDSIQKQLAFEIEDGR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00525 359 SUPERFAMILY Protein kinase-like (PK-like) 11 300 IPR011009 -
Accr8g00525 359 FunFam Wall-associated receptor kinase 2 1 106 - -
Accr8g00525 359 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 303 IPR045274 GO:0007166
Accr8g00525 359 FunFam Wall-associated receptor kinase 2 107 323 - -
Accr8g00525 359 CDD STKc_IRAK 36 303 - -
Accr8g00525 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Accr8g00525 359 Gene3D Transferase(Phosphotransferase) domain 1 107 316 - -
Accr8g00525 359 PIRSF ILK 4 318 - -
Accr8g00525 359 ProSiteProfiles Protein kinase domain profile. 30 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00525 359 SMART serkin_6 30 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00525 359 Pfam Protein tyrosine and serine/threonine kinase 33 300 IPR001245 GO:0004672|GO:0006468
Accr8g00525 359 Gene3D Phosphorylase Kinase; domain 1 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00525 Accr-Chr8 8172989 8174068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00525 16 359 Receptor kinase-like Gene Family AT1G21250 59.366 1.63e-134 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g00525 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00525 - - pcin:129293718 510.375