Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00523 ATGGGTTTCTTGAACTCACTGCATTTGAAACTGGCATTGCTGGTCACCACGGCCGCGACGCTGGCTGCGGCGGAAGCGCAGACGAAACCGGGCTGCAACAATAAGTGTGGGAACGTGAGCGTCCCATATCCCTTTGGCACTAGCGAGAACTGCTACTACAGAGATGAAGATTTAAATTTCTTCCTCAACTGCACAACCACCACTTCCCCATCATCTGGAGAAGCCACAACACAATTGATTTACGGCGATAATATACCAGTCCTCAACATCTCCCTGGATCCTCCTGAATTAACCGTCTCCGCAGACGTTTCCTACCATTGTTATAATTCAAGCTATTCGTATAATTGGATGAAGGTCGGCAAGTTTTCTATATCAAACACGGAGAACAGATTCACTGTGGTGGGGTGTGACACCTACGCTTACTTCAGGGACCTGAGCAGCACGTTTAGAACTGGCTCCATGTTGACTTGCAGTAACGAGACGAAGTTTAAGGAAGCAGGGGGGTGCTCTGGTGTGGGATGCTGTCAGACCAGTTTCCCTCAAGCCATAACGAACTATGATATCACCTTACGGAGCTTTGAAAATTACAGTGACGTGCGTGACTTCAATCCTTGTGGCTATGCGTTTATTGCCAAGGAAGGATCCTTCAACTTCTCATATCGAGAGCTGCTTAATCTCAGCAACAGAACACAATTTCCCGTGGTTGTGGACTGGTCTGTTTCCAATCAGACATGCCCTGAAGCCCAGAAAGATAAAAGGAGCTATGCCTGCAAGCAAAACAGTAGATGTAAAGAGTCAGTAAGTGGTATTGGGTACTACTGCGTATGTGAAGATGGTTTCAGAGGCAATCCCTATCTCGATACCGGCTGCAAAGATATCAATGAGTGCGATGGGGACAATCGTTGTAGTAGGAAATGCCACAACGTCAATGGAAATTATACTTGTTCATGTCCATGGGGTTATTTTGGTGACGGCTATACAAATGGATCCGGCTGCAAGTCCCCAATCAAAGAAATTTTACTGGGCATTTCTATAGGCTTGCTTGTTATCTTTACATTGGTCTCCACATTATGTTGGGGAAACAAACAAAGAACACTAAAACAACTTAGAAGACAATATTTTGAGCAAAATGGAGGAAATTATATGCTGCAACAACTTCATCAACAACAAGGATACACTGATAGAACCAAAATTTTCACCGAAGACGAGCTCAAAATTGCCACAAACAACTTTGATGAGAGCAGAATTCTCGGTCGTGGAGGACAAGGCACGGTTTACAAGGGCATATTACCAGATAACTCAATTGTTGCCATTAAAAGGTCCAGAGTAGGAGGTGACTCAAGACAAGTTAAGGATTTTGTCAATGAAGTGACTGTACTTTCCCAAATCAACCATAGGAATGTGGTTAAACTTTTTGGATGTTGTCTTGAAACTGAAGTTCCCTTGTTGGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGACCATATAGACACACTAAAGAATGAGCATTCTCTTTCGTGGGAGACTCGATTAAGGATAGCTGCAGAAATAGCCGAGGCCATTTCATATTTACACTCTTCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAAATCACAATCATATAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTCAATGAAAGTCAAGTTTCTACTGTAGTTCAAGGGACATTAGGATATCTGGACCCAGAGTACCTACTTACAGGTGAACTAAATGAGAAAAGCGATGTATATAGCTTTGGGGTTGTGCTTGTGGAGCTAATCACTGGGAATAAAGCGGTTGAATTCAATAGGTCAGGACAAAGAAATTTGGCTATGTACTTTGCATCTTCAATGAAAGAAGACAACTTATGGCAGATTCTTGACAATCGAGTGTTAGATCAGAAGAATGCAGAGCAATTAAAGGAGGTTGCTTTCTTAGCAAGAAGGTGCATTAGAATGAATGGGGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAAGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAAAAGGAGGGGATATGATGTCTGAAGAATGTAAATGCTTGCTTGGTCATGTGGCTGATGGATATGAGAATGCTAGTGCTAGCACTTCAGCTGCCTATGATAGCATCCAGAAACAGTTAGCATTTGAGATAGAAGATGGGCGATGA 2223 0.4247 MGFLNSLHLKLALLVTTAATLAAAEAQTKPGCNNKCGNVSVPYPFGTSENCYYRDEDLNFFLNCTTTTSPSSGEATTQLIYGDNIPVLNISLDPPELTVSADVSYHCYNSSYSYNWMKVGKFSISNTENRFTVVGCDTYAYFRDLSSTFRTGSMLTCSNETKFKEAGGCSGVGCCQTSFPQAITNYDITLRSFENYSDVRDFNPCGYAFIAKEGSFNFSYRELLNLSNRTQFPVVVDWSVSNQTCPEAQKDKRSYACKQNSRCKESVSGIGYYCVCEDGFRGNPYLDTGCKDINECDGDNRCSRKCHNVNGNYTCSCPWGYFGDGYTNGSGCKSPIKEILLGISIGLLVIFTLVSTLCWGNKQRTLKQLRRQYFEQNGGNYMLQQLHQQQGYTDRTKIFTEDELKIATNNFDESRILGRGGQGTVYKGILPDNSIVAIKRSRVGGDSRQVKDFVNEVTVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDTLKNEHSLSWETRLRIAAEIAEAISYLHSSASIPIIHRDIKSANILLNHNHIAKVSDFGASRLVPLNESQVSTVVQGTLGYLDPEYLLTGELNEKSDVYSFGVVLVELITGNKAVEFNRSGQRNLAMYFASSMKEDNLWQILDNRVLDQKNAEQLKEVAFLARRCIRMNGEERPTMKEVATELEGLIAMKKHPWVKGGDMMSEECKCLLGHVADGYENASASTSAAYDSIQKQLAFEIEDGR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00523 740 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Accr8g00523 740 FunFam Wall-associated receptor kinase 2 381 487 - -
Accr8g00523 740 ProSiteProfiles EGF-like domain profile. 292 327 IPR000742 -
Accr8g00523 740 SUPERFAMILY EGF/Laminin 292 325 - -
Accr8g00523 740 CDD STKc_IRAK 417 684 - -
Accr8g00523 740 SUPERFAMILY Protein kinase-like (PK-like) 392 681 IPR011009 -
Accr8g00523 740 SMART serkin_6 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00523 740 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 684 IPR045274 GO:0007166
Accr8g00523 740 FunFam Wall-associated receptor kinase 2 243 290 - -
Accr8g00523 740 Gene3D Laminin 244 326 - -
Accr8g00523 740 Gene3D Transferase(Phosphotransferase) domain 1 488 696 - -
Accr8g00523 740 FunFam Wall-associated receptor kinase 2 488 704 - -
Accr8g00523 740 SMART egf_5 244 291 IPR000742 -
Accr8g00523 740 SMART egf_5 295 333 IPR000742 -
Accr8g00523 740 Pfam Wall-associated receptor kinase galacturonan-binding 32 98 IPR025287 GO:0030247
Accr8g00523 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Accr8g00523 740 Pfam Protein tyrosine and serine/threonine kinase 414 681 IPR001245 GO:0004672|GO:0006468
Accr8g00523 740 ProSitePatterns Calcium-binding EGF-like domain signature. 292 315 IPR018097 GO:0005509
Accr8g00523 740 ProSiteProfiles Protein kinase domain profile. 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00523 740 SMART egfca_6 292 333 IPR001881 GO:0005509
Accr8g00523 740 CDD EGF_CA 292 324 - -
Accr8g00523 740 Gene3D Phosphorylase Kinase; domain 1 381 487 - -
Accr8g00523 740 FunFam Fibrillin 2 291 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00523 Accr-Chr8 8172989 8177585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00523 4 740 Receptor kinase-like Gene Family AT1G21230 45.982 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g00523 PK_Tyr_Ser-Thr 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00523 - - pcin:129293718 760.37