Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00522 ATGGCTGTGGGGATCCCAGCAGCCGCAAGTTCCGCGACTTTCGAAAAAATGAGCCCCATTACGGTGCAACAAGCCGTTGATGCTCTTCTCAAATGGAAGAATTCAAAGTCTGAAATCGAGAAACCAAAGCTATTTGACTTAGACGATGAATTCGTCTACCTCGTTCTCACCCTCAACAAGCTTCCTCCAAAGTCTCGCGTTAATGCCCACAAGATCCCTCTTCCGCATTCTCTTCTCTCCGAATTTTCCGAGTGCTGTTTGATCATCGATGACAGACCTAAGTCGATTCTTACCAAAGAGGACGTGCAGAAGAAGATCAAATCGGAGAATATTCCAGTTTCTAAAGTTATCAAGCTTTCGAAGCTTCAGTCTAATTATCGTCCCTTTGAGGCTAAGCGGAAGCTCTGTGGTTCTTACCACATGTTTTTCGCCGATAAAGGGGTGATTCCTCTGCTGCCACGGCTGTTAGGTAAGCAATTCTTTAAGAAGAAGAAGATTCCTGTGCCAGTGGATTTGAAGCATCAAAATTGGAAGGAGCAGATTGAGAGGGCATGCTCGTCCGCGTTCTTGTTTCTCAGGACAGGTACATGTAGTGTGGTGAGAGTTGCCAAAGTGTCAATGGAAAGGGACGAAATTGTTGCTAATGTGGCTGCGGCTGTCAGTGGTATCGTCGAACTCTTGCCCAAAGGTTGGGGTTCTGTACGGTCTTTTCATTTGAAGTTATTGGATTCGCTTGCGTTGCCGCTTTATCAGGTAATTCCTGATATGAAATTGAAGATTGAGGGAGTTAAGGGCATAGAGGAAGTCAAGGAAGAGGATGGAGATATTCTGAAAGATGAGGCTAAGAAGGATCTTAAAGTTGTTAAGAAGAAGGGGAGGATCCATGAAGTTCGGTACATGGATGATAATGTAGGTCACGAACTCAGTCAAGATGAGTCAGGTGTTGAGGAAGATGGGGATGTAGAAAAAGAAGATGATGATGAAATGACTGTTGAACCACTGGTAGATAAGAAGAAGAGGAAAGGATCAAAATCTGACAAAGAGGTTTTTAGTGAGGTGAATAGTGAGAAAAAATTGAAGAAGGCCTCCAAGAAAGAGGATAAAAGTAAGAAAGACGGGTTGTCTTCTAAGAGAAAGAAGGAAAATGATTTACCTGCTATGGATGAAGTTTCTGGCAAGAAGAAGAAGAACAAGGAAAGTGGAGAAGTGAAAGTAAAAGCTAAGAAAATTAAGAAGGCTGCTTCGGCCGAGTAA 1254 0.4322 MAVGIPAAASSATFEKMSPITVQQAVDALLKWKNSKSEIEKPKLFDLDDEFVYLVLTLNKLPPKSRVNAHKIPLPHSLLSEFSECCLIIDDRPKSILTKEDVQKKIKSENIPVSKVIKLSKLQSNYRPFEAKRKLCGSYHMFFADKGVIPLLPRLLGKQFFKKKKIPVPVDLKHQNWKEQIERACSSAFLFLRTGTCSVVRVAKVSMERDEIVANVAAAVSGIVELLPKGWGSVRSFHLKLLDSLALPLYQVIPDMKLKIEGVKGIEEVKEEDGDILKDEAKKDLKVVKKKGRIHEVRYMDDNVGHELSQDESGVEEDGDVEKEDDDEMTVEPLVDKKKRKGSKSDKEVFSEVNSEKKLKKASKKEDKSKKDGLSSKRKKENDLPAMDEVSGKKKKNKESGEVKVKAKKIKKAASAE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00522 417 CDD Ribosomal_L1 22 249 IPR028364 -
Accr8g00522 417 MobiDBLite consensus disorder prediction 301 417 - -
Accr8g00522 417 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Accr8g00522 417 MobiDBLite consensus disorder prediction 330 417 - -
Accr8g00522 417 MobiDBLite consensus disorder prediction 313 329 - -
Accr8g00522 417 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 244 - -
Accr8g00522 417 Gene3D - 95 187 IPR016095 -
Accr8g00522 417 Pfam Ribosomal protein L1p/L10e family 32 244 IPR028364 -
Accr8g00522 417 SUPERFAMILY Ribosomal protein L1 48 250 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00522 Accr-Chr8 8154169 8155422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00522 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 35.577 1.99e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00522 K14775 - qsa:O6P43_014803 441.039