Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00488 ATGGCAACTTCTCTACTTCGGAGAACTAGTATCATCAACAATGCTCGCCGATTCAAGTTCCCTAGTTCTTGGTGTCTCAGTGAGCTGTTGACTGAACATTTTCCCATCGATAACGCTGTCAATGAAAATGCTATTCACAGAGTTTCAAAGGGCATTTCGTTTTACTCTCAGGTTGCGAGTGGTGGTGGACTCCCATCGTCTATGCGTGGAGCTGTATTCTGGGAAAAAGGCAAGCCTCTCTCTATCGAGGAATTCCACATTCCTCGCCCCAAAGCTGGAGAAGTTCTCGTTAAAACCAAGGGTTGTGGAGTATGTCGCTCTGATCTTCACGTTATAAAGGATGAAAATCCTTTTTCAAGTCCTTGCGTGCTGGGACATGAGATAACTGGTGAAGTTGTTGAACATGGACCGCTTACAGATAATAAAACAAAGGAAAGGTGGCTTCCAATTGGATCTCGAGTCGTTGGTTCCTTCCATATGCCTTGTGGCACCTGTTTTTACTGTTCAAAGGGGCATGATGATTTATGTGAACAATTCTTTGCTTATAACAAGGCAAAAGGAACCCTCTATGACGGTGAAACTCGGCTGTTTCTCCGCAGCAGTGGAAAGCCAGTCTACATGTATTGTATGGGGGGACTTGCTGAATACTGTGTTGTGTTAGCAAATGCGTTGGCAGTGTTACCAAACTTATTGCCATATACAGAGTCTGCAATACTAGGATGTGCTGTCTTTACTGCATATGGTGCTATGACTCATGCAGCTAAGGTTCGTCCTGGGGATTCTGTTGCTGTTATTGGAACAGGTGGTGTTGGTTCTAGCTGTTTGCAAATTGCTAGAGCATTTGGTGCTTTTGAAATTATTGCGGTTGATATCCAGGATGATAAGCTAGATCAAGCAAAAACATTTGGTGCTACCCACACCGTGAATGCAGCACGTGAAGACCCAGTCGGAAAGATAATGGAAATTACCGGTGGAAAAGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCACAAACGTTTTCCCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCTGTGATGATTGGACTGACACAAGCTGGTGCTGTAGGACAAATCGAAATAAATCGTCTTGTTCGCAGGAAGATAAAAATTATTGGATCGTATGGAGGTAGAGCAAGGCAAGATCTTCCTAAGTTAGTTAGACTAGCAGAAACAGGTGTCTTCAATCTTTCCAATACTGTTTCTAGAAGATACAACTTTGAGGAGGTAGACAAAGCATTTGCAGATCTCAACCAGGGAAAAATTGTTGGACGAGCTGTCATTGAGATAAGATAA 1323 0.4346 MATSLLRRTSIINNARRFKFPSSWCLSELLTEHFPIDNAVNENAIHRVSKGISFYSQVASGGGLPSSMRGAVFWEKGKPLSIEEFHIPRPKAGEVLVKTKGCGVCRSDLHVIKDENPFSSPCVLGHEITGEVVEHGPLTDNKTKERWLPIGSRVVGSFHMPCGTCFYCSKGHDDLCEQFFAYNKAKGTLYDGETRLFLRSSGKPVYMYCMGGLAEYCVVLANALAVLPNLLPYTESAILGCAVFTAYGAMTHAAKVRPGDSVAVIGTGGVGSSCLQIARAFGAFEIIAVDIQDDKLDQAKTFGATHTVNAAREDPVGKIMEITGGKGVDVAVEALGKPQTFSQCTQSVKDGGKAVMIGLTQAGAVGQIEINRLVRRKIKIIGSYGGRARQDLPKLVRLAETGVFNLSNTVSRRYNFEEVDKAFADLNQGKIVGRAVIEIR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00488 440 CDD Zn_ADH10 68 438 - -
Accr8g00488 440 SMART PKS_ER_names_mod 77 437 IPR020843 GO:0016491
Accr8g00488 440 Gene3D - 246 383 - -
Accr8g00488 440 Pfam Alcohol dehydrogenase GroES-like domain 93 223 IPR013154 -
Accr8g00488 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 231 404 IPR036291 -
Accr8g00488 440 FunFam Alcohol dehydrogenase (Zinc) 72 259 - -
Accr8g00488 440 FunFam Sorbitol dehydrogenase 246 384 - -
Accr8g00488 440 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 437 - -
Accr8g00488 440 Pfam Zinc-binding dehydrogenase 269 399 IPR013149 -
Accr8g00488 440 Gene3D - 72 429 - -
Accr8g00488 440 SUPERFAMILY GroES-like 65 265 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00488 Accr-Chr8 7466059 7470588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00488 82 361 Monolignol Biosynthesis Gene Families AT4G37970 29.474 1.37e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00488 - - pcin:129308460 776.163