Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00487 ATGGCAACTTCTCTACTTCGGAGAACTAGTATCATCAACAATGCTCGCCGATTCAAGTTCCCTAGTTCTTGGTGTCTCAGTGAGCTGTTGACTGAACATTTTCCCATCGATAACGCTGTCAATGAAAATGCTATTCACAGAGTTTCAAAGGGCATTTCGTTTTACTCTCAGGTTGCGAGTGGTGGTGGACTCCCATCGTCTATGCGTGGAGCTGTATTCTGGGAAAAAGGCAAGCCTCTCTCTATCGAGGAATTCCACATTCCTCGCCCCAAAGCTGGAGAAGTTCTCGTTAAAACCAAGGGTTGTGGAGTATGTCGCTCTGATCTTCACGTTATAAAGGATGAAAATCCTTTTTCAAGTCCTTGCGTGCTGGGACATGAGATAACTGGTGAAGTTGTTGAACATGGACCGCTTACAGATAATAAAACAAAGGAAAGGTGGCTTCCAATTGGATCTCGAGTCGTTGGTTCCTTCCATATGCCTTGTGGCACCTGTTTTTACTGTTCAAAGGGGCATGATGATTTATGTGAACAATTCTTTGCTTATAACAAGGCAAAAGGAACCCTCTATGACGGTGAAACTCGGCTGTTTCTCCGCAGCAGTGAGTCTGCAATACTAGGATGTGCTGTCTTTACTGCATATGGTGCTATGACTCATGCAGCTAAGGTTCGTCCTGGGGATTCTGTTGCTGTTATTGGAACAGGTGGTGTTGGTTCTAGCTGTTTGCAAATTGCTAGAGCATTTGGTGCTTTTGAAATTATTGCGGTTGATATCCAGGATGATAAGCTAGATCAAGCAAAAACATTTGGTGCTACCCACACCGTGAATGCAGCACGTGAAGACCCAGTCGGAAAGATAATGGAAATTACCGGTGGAAAAGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCACAAACGTTTTCCCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCTGTGATGATTGGACTGACACAAGCTGGTGCTGTAGGACAAATCGAAATAAATCGTCTTGTTCGCAGGAAGATAAAAATTATTGGATCGTATGGAGGTAGAGCAAGGCAAGATCTTCCTAAGTTAGTTAGACTAGCAGAAACAGGTGTCTTCAATCTTTCCAATACTGTTTCTAGAAGATACAACTTTGAGGAGGTAGACAAAGCATTTGCAGATCTCAACCAGGGAAAAATTGTTGGACGAGCTGTCATTGAGATAAGATAA 1224 0.4355 MATSLLRRTSIINNARRFKFPSSWCLSELLTEHFPIDNAVNENAIHRVSKGISFYSQVASGGGLPSSMRGAVFWEKGKPLSIEEFHIPRPKAGEVLVKTKGCGVCRSDLHVIKDENPFSSPCVLGHEITGEVVEHGPLTDNKTKERWLPIGSRVVGSFHMPCGTCFYCSKGHDDLCEQFFAYNKAKGTLYDGETRLFLRSSESAILGCAVFTAYGAMTHAAKVRPGDSVAVIGTGGVGSSCLQIARAFGAFEIIAVDIQDDKLDQAKTFGATHTVNAAREDPVGKIMEITGGKGVDVAVEALGKPQTFSQCTQSVKDGGKAVMIGLTQAGAVGQIEINRLVRRKIKIIGSYGGRARQDLPKLVRLAETGVFNLSNTVSRRYNFEEVDKAFADLNQGKIVGRAVIEIR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00487 407 Gene3D - 71 196 - -
Accr8g00487 407 FunFam Sorbitol dehydrogenase 213 351 - -
Accr8g00487 407 Pfam Alcohol dehydrogenase GroES-like domain 93 184 IPR013154 -
Accr8g00487 407 SMART PKS_ER_names_mod 77 404 IPR020843 GO:0016491
Accr8g00487 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 202 371 IPR036291 -
Accr8g00487 407 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 404 - -
Accr8g00487 407 SUPERFAMILY GroES-like 65 232 IPR011032 -
Accr8g00487 407 CDD Zn_ADH10 68 405 - -
Accr8g00487 407 Gene3D - 213 350 - -
Accr8g00487 407 Gene3D - 202 396 - -
Accr8g00487 407 Pfam Zinc-binding dehydrogenase 236 366 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00487 Accr-Chr8 7466059 7470588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00487 82 406 Monolignol Biosynthesis Gene Families AT4G37990 25.723 2.53e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00487 - - pcin:129308460 710.679