Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00486 ATGGCAACTTCTCTACTTCGGAGAACTAGTATCATCAACAATGCTCGCCGATTCAAGTTCCCTAGTTCTTGGTGTCTCAGTGAGCTGTTGACTGAACATTTTCCCATCGATAACGCTGTCAATGAAAATGCTATTCACAGAGTTTCAAAGGGCATTTCGTTTTACTCTCAGGTTGCGAGTGGTGGTGGACTCCCATCGTCTATGCGTGGAGCTGTATTCTGGGAAAAAGGCAAGCCTCTCTCTATCGAGGAATTCCACATTCCTCGCCCCAAAGCTGGAGAAGTTCTCGTTAAAACCAAGGGTTGTGGAGTATGTCGCTCTGATCTTCACGTTATAAAGGATGAAAATCCTTTTTCAAGTCCTTGCGTGCTGGGACATGAGATAACTGGTGAAGTTGTTGAACATGGACCGCTTACAGATAATAAAACAAAGGAAAGGCTTCCAATTGGATCTCGAGTCGTTGGTTCCTTCCATATGCCTTGTGGCACCTGTTTTTACTGTTCAAAGGGGCATGATGATTTATGTGAACAATTCTTTGCTTATAACAAGGCAAAAGGAACCCTCTATGACGGTGAAACTCGGCTGTTTCTCCGCAGCAGTGGAAAGCCAGTCTACATGTATTGTATGGGGGGACTTGCTGAATACTGTGTTGTGTTAGCAAATGCGTTGGCAGTGTTACCAAACTTATTGCCATATACAGAGTCTGCAATACTAGGATGTGCTGTCTTTACTGCATATGGTGCTATGACTCATGCAGCTAAGGTTCGTCCTGGGGATTCTGTTGCTGTTATTGGAACAGGTGGTGTTGGTTCTAGCTGTTTGCAAATTGCTAGAGCATTTGGTGCTTTTGAAATTATTGCGGTTGATATCCAGGATGATAAGCTAGATCAAGCAAAAACATTTGGTGCTACCCACACCGTGAATGCAGCACGTGAAGACCCAGTCGGAAAGATAATGGAAATTACCGGTGGAAAAGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCACAAACGTTTTCCCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCTGTGATGATTGGACTGACACAAGCTGGTGCTGTAGGACAAATCGAAATAAATCGTCTTGTTCGCAGGAAGATAAAAATTATTGGATCGTATGGAGGTAGAGCAAGGCAAGATCTTCCTAAGTTAGTTAGACTAGCAGAAACAGGTGTCTTCAATCTTTCCAATACTGTTTCTAGAAGATACAACTTTGAGGAGGTAGACAAAGCATTTGCAGATCTCAACCAGGGAAAAATTGTTGGACGAGCTGTCATTGAGATAAGATAA 1320 0.4341 MATSLLRRTSIINNARRFKFPSSWCLSELLTEHFPIDNAVNENAIHRVSKGISFYSQVASGGGLPSSMRGAVFWEKGKPLSIEEFHIPRPKAGEVLVKTKGCGVCRSDLHVIKDENPFSSPCVLGHEITGEVVEHGPLTDNKTKERLPIGSRVVGSFHMPCGTCFYCSKGHDDLCEQFFAYNKAKGTLYDGETRLFLRSSGKPVYMYCMGGLAEYCVVLANALAVLPNLLPYTESAILGCAVFTAYGAMTHAAKVRPGDSVAVIGTGGVGSSCLQIARAFGAFEIIAVDIQDDKLDQAKTFGATHTVNAAREDPVGKIMEITGGKGVDVAVEALGKPQTFSQCTQSVKDGGKAVMIGLTQAGAVGQIEINRLVRRKIKIIGSYGGRARQDLPKLVRLAETGVFNLSNTVSRRYNFEEVDKAFADLNQGKIVGRAVIEIR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00486 439 Gene3D - 245 382 - -
Accr8g00486 439 Pfam Zinc-binding dehydrogenase 268 398 IPR013149 -
Accr8g00486 439 SUPERFAMILY GroES-like 65 262 IPR011032 -
Accr8g00486 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 230 403 IPR036291 -
Accr8g00486 439 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 436 - -
Accr8g00486 439 Gene3D - 72 428 - -
Accr8g00486 439 SMART PKS_ER_names_mod 77 436 IPR020843 GO:0016491
Accr8g00486 439 FunFam Sorbitol dehydrogenase 245 383 - -
Accr8g00486 439 CDD Zn_ADH10 68 437 - -
Accr8g00486 439 Pfam Alcohol dehydrogenase GroES-like domain 93 222 IPR013154 -
Accr8g00486 439 FunFam Alcohol dehydrogenase (Zinc) 72 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00486 Accr-Chr8 7466059 7470588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00486 82 360 Monolignol Biosynthesis Gene Families AT4G37970 29.577 5.59e-17 79.3