Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00484 ATGGCAACTTCTCTACTCCGGAGAACCAGTATCATCCACAATGCTCGCCGATTCAAGTTCCCTAGTTCTTGGTGTCTCAGTGAGCTGTTGACTCAACATTTTCCCATCGATAACGCTGTCAATGAAAATGCTATTCACAGAGTTTCAAAGGGCGTTTCGTTTTACTCTCAGGTTGCGAGTGGTGGTGGACTCCCATCGTCTATGCGTGGAGCTGTATTCTGGGAAAAAGGCAAGCCTCTCTCTATCGAGGAATTCCACATTCCTCGCCCTAAGGCTGGAGAAGTTCTCGTTAAAACCAAGGCTTGTGGGGTATGTCACTCCGATCTTCACGTTATAAAGGATGAAATTCCTTTTTCAAGTCCTTGCGTGCTGGGACATGAGATAACTGGCGAAGTTGTTGAACATGGACCGCTCACAGATAATAAAACAAAGGAAAGGCTTCCAATTGGATCTCGAGTCGTTGGTTCCTTCCATATGCCTTGTGGCACCTGTTTTTACTGTTCAAAGGGGCATGATGATTTATGTGAACAATTCTTTGCTTATAACAAGGCAAAAGGAACCCTCTATGACGGTGAAACTCGGCTGTTTCTCCGCAGCAGTGGAAAGCCAGTCTACATGTATTGTATGGGGGGACTTGCTGAATACTGTGTTGTGTTAGCAAATGCGTTGGCAGTGTTACCAAACTTATTGCCATATACAGAGTCTGCAATACTAGGATGTGCTGTCTTTACTGCATATGGTGCTATGACTCATGCAGCTAAGGTTCGTCCTGGGGATTCTGTTGCTGTTATTGGAACAGGTGGTGTTGGTTCTAGCTGTTTGCAAATTGCTAGAGCATTTGGTGCTTTTGAAATTATTGCGGTTGATATCCAGGATGATAAGCTAGATCAAGCAAAAACATTTGGTGCTACCCACACCGTGAATGCAGCACGTGAAGACCCAGTCGGAAAGATAATGGAAATTACCGGTGGAAAAGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCACAAACGTTTTCCCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCTGTGATGATTGGACTGACACAAGCTGGTGCTGTAGGACAAATCGAAATAAATCGTCTTGTTCGCAGGAAGATAAAAATTATTGGATCGTATGGAGGTAGAGCAAGGCAAGATCTTCCTAAGTTAGTTAGACTAGCAGAAACAGGTGTCTTCAATCTTTCCAATACTGTTTCTAGAAGATACAACTTTGAGGAGGTAGACAAAGCATTTGCAGATCTCAACCAGGGAAAAATTGTTGGACGAGCTGTCATTGAGATAAGATAA 1320 0.4394 MATSLLRRTSIIHNARRFKFPSSWCLSELLTQHFPIDNAVNENAIHRVSKGVSFYSQVASGGGLPSSMRGAVFWEKGKPLSIEEFHIPRPKAGEVLVKTKACGVCHSDLHVIKDEIPFSSPCVLGHEITGEVVEHGPLTDNKTKERLPIGSRVVGSFHMPCGTCFYCSKGHDDLCEQFFAYNKAKGTLYDGETRLFLRSSGKPVYMYCMGGLAEYCVVLANALAVLPNLLPYTESAILGCAVFTAYGAMTHAAKVRPGDSVAVIGTGGVGSSCLQIARAFGAFEIIAVDIQDDKLDQAKTFGATHTVNAAREDPVGKIMEITGGKGVDVAVEALGKPQTFSQCTQSVKDGGKAVMIGLTQAGAVGQIEINRLVRRKIKIIGSYGGRARQDLPKLVRLAETGVFNLSNTVSRRYNFEEVDKAFADLNQGKIVGRAVIEIR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00484 439 Gene3D - 245 382 - -
Accr8g00484 439 Gene3D - 72 428 - -
Accr8g00484 439 Pfam Zinc-binding dehydrogenase 268 398 IPR013149 -
Accr8g00484 439 SUPERFAMILY GroES-like 65 262 IPR011032 -
Accr8g00484 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 230 403 IPR036291 -
Accr8g00484 439 SMART PKS_ER_names_mod 77 436 IPR020843 GO:0016491
Accr8g00484 439 FunFam Sorbitol dehydrogenase 245 383 - -
Accr8g00484 439 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 436 - -
Accr8g00484 439 CDD Zn_ADH10 68 437 - -
Accr8g00484 439 FunFam Alcohol dehydrogenase (Zinc) 72 258 - -
Accr8g00484 439 Pfam Alcohol dehydrogenase GroES-like domain 93 222 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00484 Accr-Chr8 7466059 7478230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00484 82 360 Monolignol Biosynthesis Gene Families AT4G37970 29.930 3.49e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00484 - - pcin:129308460 787.719