Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00482 ATGCCTCTTTTAAAAAGGAAGCCTTTTGTCCTGGCTGAGCCACCTAAGGATTTGGAGCCAAATGTGCTTGTCCATCAAGTTCGATTTACGAAAGAAATATTCCGAAATTATCATGATTATTTGAACCGTATAAATTTGTACCGCCAAAGAGTTTGGACATGTAAAGTCACCGGGAAATCTAACTTGACTTATGAAGAGGCTATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGGCTCCTGCTCTAAGGATTATCCAATTCAGCATGCTTCCTTTGAGGGATCTCGCCGATGCAATAGGTGAAAAGTTGCAGGAACAGGTGTATGTGGGTGCTGAGCTTCATGGAAAAAAGGATGATGGAGAACATCCCTGCAAAATATTGAAAGTCGTGCAGGAAGGGGTTGATGAATTCCGTTATGAGATAGCTTGGCTCGACAAAAACAGGAAAACAATTGAAAAAGCAGAACTCAGTGCCAAGGATTTAGTGCAGAAGAAGTTTCCTTTTAGCAGGAATATCTTGAAATCTTTTATCCGGGAATCTACATATCGTAATGCTCCTTGGGTGATACACGATGAGTTGGCACGAAATTATGGAATCTCAACTGATATCCCAGAGGAATTAAAGGGAAGAGCTTTCTTCAACAACGGACTTTTAATTTGCAACAAGAAAAGGAAAAATGAGGATGTAGATGGCGAAGCTGAGAATTGCAAAAAGAGGAAGTCAGATCACGCAAAAAATGGTGGCTCCTCTTCAGTGAAAGAAAATGGCCAATGTAAGGAGGAACCTATCAAATATCCTATTGATGATTTATTGGTGCAGCCTAGTCCAAGGGATCCCGGTTTTGCTGATCGTCCTTCTCCATCGAGGGACTTCAATGTTCCAGTTCTTTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGTCACCCTACTCTTTGGAAGATTTTGAAAACTCTCTCTGCCACAAGGAAAGCAATGTGGTTCTTCTTGTGGAATCTCATGCAGCACTCTTGCGGGTGCTCATGAAAGACGATGGTGAGTATGCTTCAGCTGTACAGAAGAGAAAACGGAAGTTTAAGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACGGCACTTTGAAGCTACCATAAAAAGGGGACATTATGGCCTCATTGATATCAATGCTAAGCTAGAAATCTTGTGCGAATTGGTCAATCGAGTTCTTGAAACCTCCATTCTTAGGGAAAAGTTGGATGAGGTTATTGAACAGCGGCTGGCACTTGGTGCTACTAGAAGAGGAGAGGCGCTAGAAGATGGTAGAAAAAGAAGAGAAGAGAAGGAACGGTTGAAAACTGAGATTGAAAGCAATGAGAGTATGGATGGGCACTGTAAAACTAATGGAGCAACTGTGTCAACAAAAAATAATCACAGTAGACAGAACGGAGACATAGGAAAGAAAAGAAATGGAGAAAAGGAATCATCTAGGAATGGGGATGCTTTGGGTGGAAGTATGGATAAGCATTCAAATGGTGCGTCCAAAAAGTCCTCTAAGAAACTGAGTTTAGAACTGAAAGAACCAGCGGAAAATGGAAATGAATCATCCAGAAAGGAATCGCAGAAGCAATTAAACGTGGAGAAGGATCCATCAGATAAGAATAGTATAGAACAGAGGAGAGAATATTTTGAGCGAGAGATGGAAAAACGATTTGTTCGTACGAGTCCCCTAGGTAAAGACAGGCATTATAACAGGTATTGGTGGTTTCGTCGTGATGGGAGGATATTTGTAGAAAGTTCTGATTCCAAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGCTTGACCCATTGATGAAGACACTAAATCGCAAGGGTGTGCGGGAAAGAGCATTGCAAAATCAACTGGAAAAATATTATAGTAGAATATGTACGGAACTTCAGAAGAGATCCAAGGAACAGACACAGAAGATTGCCCTAGATGAGTCTGTGCTCCGAAGGTCTACTCGTGTCCGTGCACCACCTAGAGAAAATCCTGCCAATGCTTTCCTCAAATATGTCAACAAGTGGAAGGAAGAGTAG 2142 0.4136 MPLLKRKPFVLAEPPKDLEPNVLVHQVRFTKEIFRNYHDYLNRINLYRQRVWTCKVTGKSNLTYEEAMVSEKRATEKVQQIPKELMAPALRIIQFSMLPLRDLADAIGEKLQEQVYVGAELHGKKDDGEHPCKILKVVQEGVDEFRYEIAWLDKNRKTIEKAELSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELARNYGISTDIPEELKGRAFFNNGLLICNKKRKNEDVDGEAENCKKRKSDHAKNGGSSSVKENGQCKEEPIKYPIDDLLVQPSPRDPGFADRPSPSRDFNVPVLCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENSLCHKESNVVLLVESHAALLRVLMKDDGEYASAVQKRKRKFKITMINWQEYLCDFLEMINVPGLRHFEATIKRGHYGLIDINAKLEILCELVNRVLETSILREKLDEVIEQRLALGATRRGEALEDGRKRREEKERLKTEIESNESMDGHCKTNGATVSTKNNHSRQNGDIGKKRNGEKESSRNGDALGGSMDKHSNGASKKSSKKLSLELKEPAENGNESSRKESQKQLNVEKDPSDKNSIEQRREYFEREMEKRFVRTSPLGKDRHYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELDPLMKTLNRKGVRERALQNQLEKYYSRICTELQKRSKEQTQKIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00482 713 MobiDBLite consensus disorder prediction 238 264 - -
Accr8g00482 713 Coils Coil 459 479 - -
Accr8g00482 713 Pfam DDT domain 305 361 IPR018501 -
Accr8g00482 713 MobiDBLite consensus disorder prediction 502 517 - -
Accr8g00482 713 MobiDBLite consensus disorder prediction 483 501 - -
Accr8g00482 713 SMART testlast3 303 364 IPR018501 -
Accr8g00482 713 Coils Coil 152 172 - -
Accr8g00482 713 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Accr8g00482 713 MobiDBLite consensus disorder prediction 238 255 - -
Accr8g00482 713 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 711 - -
Accr8g00482 713 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Accr8g00482 713 MobiDBLite consensus disorder prediction 540 578 - -
Accr8g00482 713 ProSiteProfiles WAC domain profile. 22 129 IPR013136 -
Accr8g00482 713 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 593 659 IPR028941 -
Accr8g00482 713 MobiDBLite consensus disorder prediction 455 482 - -
Accr8g00482 713 MobiDBLite consensus disorder prediction 455 578 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00482 579 658 Homeobox Transcription Factor Family AT5G44180 42.697 2.43e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Accr8g00482 WAC_Acf1_DNA_bd 2.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00482 - - qsa:O6P43_023448 997.267