LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr8g00469	ATGGCTTACGTTCCGGTGAATTCTTTACCCGTAGCGTACCAGGCATGGACAAGCCCCGCCGTACCGGACTGGCTGAACAAAGGGGACAACGCCTGGCAGATGATCTCGGCAACTCTGGTGGGGATACAGAGCATGCCGGGGCTTGTAATTCTCTATGGTAGCATTGTGAAGAAGAAATGGGCCGTCAACTCTGCTTTCATGGCTCTATATGCCTTCGCCGCCGTTTGCATCTGCTGGGTCACTTGGGCCTACAAGATGTCCTTCGGTGAGAAGCTTTGGCCCTTCTGGGGCAAGGCCGGGCCGGCGTTGGGGCAAAAGTTTCTTCTCGGTCGGGCGGCGCTGCCGGCGACGCCTCATTACTTTAAGAAAGGCGGGCAGAAAGGCATGCTGGAGACGGCAGAGGCAGAGCCGTTCTACCCGATGGCGTCCATGGTGTGGTTTCAGTGCGTGTTCGCCGCCATCGCGGTGGTTATACTTGCCGGATCTGTGCTGGCGAGGATGAATTTCAAAGCTTGGATGATGTTTGTACCGTTATGGCTGACGTTTTCGTATACCGTTGGAGCTTTCAGCTTGTGGGGTGGTGGGTTCTTGTTTCACTGGGGTGTTATGGACTACTCCGGCGGCTACGTCATCCATCTTTCTTCTGGGATTGCTGGTTTCACCGCGGCTTACTGGGTGGGACCAAGGTTGAAGAAGGATAGAGAGAGGTTTCCGCCCAACAATGTGTTGCTGACGCTGGCGGGGGCGGGGCTGTTGTGGATGGGATGGGCAGGCTTTAACGGCGGCGATCCCTTCTCGGCCAACACTGACTCTTCCATGGCGGTTCTCAATACCAACATATGCGCCGCCACCAGTCTGTTAGTGTGGACCTGTCTTGATGTCATATTCTTCAACAAACCCTCCGTCATCGGAGCTGTCCAGGGCATGATCACGGGTCTCGTTTGCATCACTCCCGGTGCCGGTCTCGTACAAGGATGGGCAGCCATAGTGATGGGAGTTTTATCAGGCAGTGTTCCATGGTTCAGCATGATGATATTAGGCAAGAAGCTCAAAATATTCCAAATGGTCGACGACACCCTCGCCGTCTTCCACACTCACGCCGTTGCCGGACTTCTTGGCGGCATCCTCACTGGTCTCTTCGCGGAGCCTCACCTGAGTGCTCTCTTCCTCGCCGTAACCAACTCAAGAGGAGGCGTGTACGGCGGCTCTGGCGGAGTCCAGATCCTGAAACAAATAGCGGGAGGGCTGTTCATTGTAGGTTGGAACATAGTGGTGACATCCATTATCTGTGTTTTCATAAAGTTCATAATTCCTCTGAGGATGTCGGAGGAGGAACTGTTGATCGGAGACGACGCCGTCCACGGAGAAGAAGCTTATGCGTTGTGGGGCGATGGAGAGAAGTTGAGTATATATTCTGACGATACTACTCATCACAATGCCGTTTTGGCATCAAGTGGTGCCACTCAAGTCGTCTAA	1476	0.5413	MAYVPVNSLPVAYQAWTSPAVPDWLNKGDNAWQMISATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVCICWVTWAYKMSFGEKLWPFWGKAGPALGQKFLLGRAALPATPHYFKKGGQKGMLETAEAEPFYPMASMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRLKKDRERFPPNNVLLTLAGAGLLWMGWAGFNGGDPFSANTDSSMAVLNTNICAATSLLVWTCLDVIFFNKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGVLSGSVPWFSMMILGKKLKIFQMVDDTLAVFHTHAVAGLLGGILTGLFAEPHLSALFLAVTNSRGGVYGGSGGVQILKQIAGGLFIVGWNIVVTSIICVFIKFIIPLRMSEEELLIGDDAVHGEEAYALWGDGEKLSIYSDDTTHHNAVLASSGATQVV	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr8g00469	491	PRINTS	Rhesus blood group protein signature	329	347	IPR002229	GO:0005886
	Accr8g00469	491	PRINTS	Rhesus blood group protein signature	274	296	IPR002229	GO:0005886
	Accr8g00469	491	PRINTS	Rhesus blood group protein signature	148	164	IPR002229	GO:0005886
	Accr8g00469	491	PRINTS	Rhesus blood group protein signature	243	261	IPR002229	GO:0005886
	Accr8g00469	491	ProSitePatterns	Ammonium transporters signature.	204	229	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Accr8g00469	491	PANTHER	AMMONIUM TRANSPORTER MEP2	16	468	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Accr8g00469	491	NCBIfam	ammonium transporter	29	459	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Accr8g00469	491	SUPERFAMILY	Ammonium transporter	24	441	-	-
	Accr8g00469	491	Gene3D	Ammonium transporter AmtB like domains	4	462	IPR029020	-
	Accr8g00469	491	FunFam	Ammonium transporter	12	462	-	-
	Accr8g00469	491	Pfam	Ammonium Transporter Family	31	459	IPR024041	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr8g00469	Accr-Chr8	7203633	7208246	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr8g00469	141	478	Inorganic Solute Cotransporters	AT2G38290	71.302	1.48e-167	475

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr8g00469	K03320		-	gmx:100785993	888.641