Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00466 ATGCTTCGCCCAAAATTTATTGGGGACACTCTGAAATTAATGACAAGGTTACTGCTGTTCCTCAGTGTCCTGAGACTCAGTTCTGCAACCACAGATCCTGACGTGGAAGGTGAAGCTTTATATGAAGTTAGGCAGGCTCTCCATGATCCCCTCCATCAAATAGCTGATTGGAATGATTTTTTTGTGTCTCCATGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTTATAGCCCTGAGCCTGGCTACATATGAACTTTCTGGAACAATATCTCCTTCAATAACCAGATTGAAATATTTGTCTAGCTTGGAGTTGCAGAACAACAAATTCTCTGGCCCGTTGCCTGATTATATTGCCAATCTGACACAACTTCAATATCTCAATCTTGGAGACAATCATTTTAGTGGTTCTGTTCCAGCTAGCTGGGGCAAACTTCAAAATCTAAAGAACCTGATCTTAAGAGGGAATGATTTATCTGGAACTGTACCACCCACGCTCGCTAATATTAGTGGATTGGCAGAATTGGATCTTTCATCTAATGGTCTAACTGGAGACATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACTCAACTTCATTGTGGATCTCATCATTTGGAGCGGCCTTGCGTTTCTAATTCTGCGATCCCAGCTTCCACCAACAAATCAAAAGTTGCAGTTGCTGTGAGTTTTGCTAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCATATAGATACCAATACATACAAAATGAAGTCTTCTTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGTTACAACTTGCCACTAAGAATTTCAGTGAGAGCAATGTGATTGGCCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCAGATGACACTAAAGTTGCTATAAAACGTCTAGCTGATTACAATAATCCTGGTGGAGAGGCTGCATTCCACAGAGAAGTTCAACTAATCAGTGTTGCAGTTCACAGGAACCTCCTTCGCCTAATCGGATTTTGCACAACCTCTACCGAGAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGCGTAGCGTATCGCTTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAACAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAGGATCATACACCGCGATCTAAAAGCTGCAAACATCTTACTAGACAATGACTTTGAAGCTGTACTCGGAGATTTCGGCTTGGCGAAGCTCGTTGACACAAGGCTGACCCATGTCACCACTCAGGTGCGAGGCACATTGGGCCATATTGCCCCTGAATACCTTTCCACTGGAAAATCAACAGAGAAGACCGATGTCTTTGGATACGGCATAACTCTCCTTGAACTTGTCACCGGTCAGCGTGCCATAGACTTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTTTGCTTGATCATATAAAGAAGCTACTGAGAGAGAACAGGCTAGAGGACATAGTGGATAGGAATCTGGATAGTTATGATCCAAAAGAAGTGGAAACAATAGTTCAAGTAGCATTGCTTTGCACACAAGGCATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAAGGTGTGGGTTTAGCAGAGAGATGGGCAGAGTGGGAGCAATTAGAAGATATCAGTAATCAAGAATTCTCATTACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCTTCAAGAGGCTATACAACTTTCCACAGCAAGATAA 1851 0.4317 MLRPKFIGDTLKLMTRLLLFLSVLRLSSATTDPDVEGEALYEVRQALHDPLHQIADWNDFFVSPCVSWSHVTCRNGHVIALSLATYELSGTISPSITRLKYLSSLELQNNKFSGPLPDYIANLTQLQYLNLGDNHFSGSVPASWGKLQNLKNLILRGNDLSGTVPPTLANISGLAELDLSSNGLTGDIPMQLFSVPSFNFSNTQLHCGSHHLERPCVSNSAIPASTNKSKVAVAVSFASCGALALLCLGAIFAYRYQYIQNEVFFDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTKVAIKRLADYNNPGGEAAFHREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPRIIHRDLKAANILLDNDFEAVLGDFGLAKLVDTRLTHVTTQVRGTLGHIAPEYLSTGKSTEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLDSYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEDISNQEFSLLSHHFAWADESTLQEAIQLSTAR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00466 616 ProSiteProfiles Protein kinase domain profile. 295 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00466 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Accr8g00466 616 SUPERFAMILY L domain-like 36 219 - -
Accr8g00466 616 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Accr8g00466 616 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00466 616 Gene3D Transferase(Phosphotransferase) domain 1 372 588 - -
Accr8g00466 616 FunFam Somatic embryogenesis receptor-like kinase 1 372 588 - -
Accr8g00466 616 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 579 - -
Accr8g00466 616 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Accr8g00466 616 SUPERFAMILY Protein kinase-like (PK-like) 273 568 IPR011009 -
Accr8g00466 616 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 34 195 - -
Accr8g00466 616 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Accr8g00466 616 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Accr8g00466 616 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Accr8g00466 616 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00466 Accr-Chr8 7137014 7140667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00466 14 616 Receptor kinase-like Gene Family AT5G10290 55.665 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Accr8g00466 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00466 - - pcin:129307818 1064.68