Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00465 ATGCTTCGCCCAAAATTTATTGGGGACACTCTGAAATTAATGACAAGGTTACTGCTGTTCCTCAGTGTCCTGAGACTCAGTTCTGCAACCACAGATCCTGACGTGGAAGGTGAAGCTTTATATGAAGTTAGGCAGGCTCTCCATGATCCCCTCCATCAAATAGCTGATTGGAATGATTTTTTTGTGTCTCCATGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTTATAGCCCTGAGCCTGGCTACATATGAACTTTCTGGAACAATATCTCCTTCAATAACCAGATTGAAATATTTGTCTAGCTTGGAGTTGCAGAACAACAAATTCTCTGGCCCGTTGCCTGATTATATTGCCAATCTGACACAACTTCAATATCTCAATCTTGGAGACAATCATTTTAGTGGTTCTGTTCCAGCTAGCTGGGGCAAACTTCAAAATCTAAAGAACCTGGATCTTTCATCTAATGGTCTAACTGGAGACATCCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACTCAACTTCATTGTGGATCTCATCATTTGGAGCGGCCTTGCGTTTCTAATTCTGCGATCCCAGCTTCCACCAACAAATCAAAAGTTGCAGTTGCTGTGAGTTTTGCTAGTTGTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCATATAGATACCAATACATACAAAATGAAGTCTTCTTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGTTACAACTTGCCACTAAGAATTTCAGTGAGAGCAATGTGATTGGCCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCAGATGACACTAAAGTTGCTATAAAACGTCTAGCTGATTACAATAATCCTGGTGGAGAGGCTGCATTCCACAGAGAAGTTCAACTAATCAGTGTTGCAGTTCACAGGAACCTCCTTCGCCTAATCGGATTTTGCACAACCTCTACCGAGAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGCGTAGCGTATCGCTTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAACAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAGGATCATACACCGCGATCTAAAAGCTGCAAACATCTTACTAGACAATGACTTTGAAGCTGTACTCGGAGATTTCGGCTTGGCGAAGCTCGTTGACACAAGGCTGACCCATGTCACCACTCAGGTGCGAGGCACATTGGGCCATATTGCCCCTGAATACCTTTCCACTGGAAAATCAACAGAGAAGACCGATGTCTTTGGATACGGCATAACTCTCCTTGAACTTGTCACCGGTCAGCGTGCCATAGACTTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTTTGCTTGATCATATAAAGAAGCTACTGAGAGAGAACAGGCTAGAGGACATAGTGGATAGGAATCTGGATAGTTATGATCCAAAAGAAGTGGAAACAATAGTTCAAGTAGCATTGCTTTGCACACAAGGCATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAAGGTGTGGGTTTAGCAGAGAGATGGGCAGAGTGGGAGCAATTAGAAGATATCAGTAATCAAGAATTCTCATTACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCTTCAAGAGGCTATACAACTTTCCACAGCAAGATAA 1779 0.4323 MLRPKFIGDTLKLMTRLLLFLSVLRLSSATTDPDVEGEALYEVRQALHDPLHQIADWNDFFVSPCVSWSHVTCRNGHVIALSLATYELSGTISPSITRLKYLSSLELQNNKFSGPLPDYIANLTQLQYLNLGDNHFSGSVPASWGKLQNLKNLDLSSNGLTGDIPMQLFSVPSFNFSNTQLHCGSHHLERPCVSNSAIPASTNKSKVAVAVSFASCGALALLCLGAIFAYRYQYIQNEVFFDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTKVAIKRLADYNNPGGEAAFHREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPRIIHRDLKAANILLDNDFEAVLGDFGLAKLVDTRLTHVTTQVRGTLGHIAPEYLSTGKSTEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLDSYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEDISNQEFSLLSHHFAWADESTLQEAIQLSTAR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00465 592 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Accr8g00465 592 Gene3D Transferase(Phosphotransferase) domain 1 348 564 - -
Accr8g00465 592 ProSiteProfiles Protein kinase domain profile. 271 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00465 592 SMART serkin_6 271 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00465 592 SUPERFAMILY Protein kinase-like (PK-like) 249 544 IPR011009 -
Accr8g00465 592 Pfam Protein kinase domain 272 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00465 592 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 555 - -
Accr8g00465 592 SUPERFAMILY L domain-like 36 188 - -
Accr8g00465 592 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Accr8g00465 592 FunFam Somatic embryogenesis receptor kinase 1 240 347 - -
Accr8g00465 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Accr8g00465 592 Gene3D Phosphorylase Kinase; domain 1 240 347 - -
Accr8g00465 592 FunFam Somatic embryogenesis receptor-like kinase 1 348 564 - -
Accr8g00465 592 Gene3D Ribonuclease Inhibitor 33 211 IPR032675 -
Accr8g00465 592 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Accr8g00465 592 FunFam Nuclear pore complex protein NUP107 34 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00465 Accr-Chr8 7137014 7140667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00465 14 592 Receptor kinase-like Gene Family AT5G10290 54.187 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Accr8g00465 Pkinase 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00465 - - pcin:129307818 1011.13