Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00458 ATGGGCCGATCTCCTTGCTGCGAGAAACAACACACTAACAAAGGTGCTTGGACCAAAGACGAAGACCAACGCCTCATTAATTACATCTCCCTCCACGGCCAAGGCTCCTGGCGTTCCCTCCCCAAAGCCGCCGGTTTGATGAGATGTGGGAAAAGTTGCAGGCTGAGATGGATTAACTATCTGAGGCCTGATCTTAAGAGAGGCAATTTCACTCAGGAGGAAGATGATCTTATTATCAACCTTCACAGCTTACTCGGCAACAAGTGGTCTTTAATCGCGGCTAGGTTACCGGGTCGAACCGATAATGAGATCAAGAACTATTGGAACACCCACGTTAAGCGCAAACTCTACAGCCTCGGAATCGACCCTCAAACCCACCGTCCACTCCCCTCCGCCGCCTCCGTAGCCATCACCACTCCGGCGACCACCAGCGGTACTATCAAGAGAAGAACCAGTAACAACCAAAATAATAACCCTAAACTCAAGCCAGTCTCATCATCAGGGGATTCAAATAGCAACAGCAGCAGCGGGATTACCACAGACGAATCAGCCAATTCTGATAATAATAATAATGATAATCATCACCAACTCATCAACTTGGAGCTCTCCATAGGTCTCCCTGCTTCCTCCAACGACAGTAAAACCCTCGTCGTTCACCCCTCTGATGCAGTCTCAGACGACAAGTTATTAAATCGACAACGACGTGATGATAATAAAGAAGTGTGTCTGTGTTGCAGTTTAGGGTTTCAGAGCGTCGTTGGTAATAATCAAGCATGTAGGTGCAAGGCCATGATCAGAAATACTTGTTCAGTTATTACTACTGCACCTACTTCTTCTCCTGCTCCTGCTGCTTCTTCAGACATTAACGTTTGCAGTTTTTTCACTCCCTTAAATTCTTAG 900 0.4689 MGRSPCCEKQHTNKGAWTKDEDQRLINYISLHGQGSWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVKRKLYSLGIDPQTHRPLPSAASVAITTPATTSGTIKRRTSNNQNNNPKLKPVSSSGDSNSNSSSGITTDESANSDNNNNDNHHQLINLELSIGLPASSNDSKTLVVHPSDAVSDDKLLNRQRRDDNKEVCLCCSLGFQSVVGNNQACRCKAMIRNTCSVITTAPTSSPAPAASSDINVCSFFTPLNS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00458 299 FunFam Myb-related protein 308 69 116 - -
Accr8g00458 299 CDD SANT 69 112 IPR001005 -
Accr8g00458 299 FunFam MYB-related transcription factor 13 66 - -
Accr8g00458 299 CDD SANT 16 61 IPR001005 -
Accr8g00458 299 Gene3D - 14 66 - -
Accr8g00458 299 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 200 - -
Accr8g00458 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr8g00458 299 SMART sant 13 63 IPR001005 -
Accr8g00458 299 SMART sant 66 114 IPR001005 -
Accr8g00458 299 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr8g00458 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr8g00458 299 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr8g00458 299 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr8g00458 299 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Accr8g00458 299 Gene3D - 69 116 - -
Accr8g00458 299 MobiDBLite consensus disorder prediction 131 194 - -
Accr8g00458 299 MobiDBLite consensus disorder prediction 128 194 - -
Accr8g00458 299 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00458 Accr-Chr8 7013031 7014311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00458 1 210 MYB Transcription Factor Family AT4G09460 60.930 1.17e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr8g00458 Myb_DNA-binding 3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00458 K09422 - gmx:778033 322.013