Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00450 ATGGAAGAGTGTGGTGCTTTCATTGATCAGCTTGAGGGATACAAAAGCAAACTCTCATCAAGAATTCCTAAAGATGAGGAAGAGGATTTGGAAAATGAAGATTTTAAAGTTAAAACTATCTTCATACCAAAATCTAAGAAAAGAAAGCAGCCCAGCTGTAATCAGCTTGGAGAGATGAAAGAAGAACTGTTAGATGGAGAACAAGGGCAAGGTATTAGCAAGCGTAAGACAAAGACGCATCGGAGTTGCAATAGGTGGTCAGATGAAAGGTATCAGCAGGCTGAGCAAAGAATGTGGGAGCTATTGAAGGCTGCAGGAGCAAATTTTGCAAACCCAATTTCGCGACATGCTTTGAGAAAGGCTGCCCGTCAGCACATTGGTGATACTGGACTTTTAGATCACTTACTGAAGCAAATTGATGGTAAAATAGCACCTGGAGGGACAGAACGGTTTCGACGGTGTTACAACCCCCAAGGAATTATGAAGTATTGGTTGGAGAGTTCTCACCTAGATAAAGCCCGTCAGGAGGCTGGGGTGCAGGATCCTTATTGGCGGCCACCTTCTAATTTTAGTGCAGGCAATGCCCCCTCTCAGAATACTGATTCTTCTTGTGAACTGAAGTTGCTACAGATAGAAATGGCCAAAATGAAGAGAGATATGCAGGAACTGATATATAAGAAGCAAGAGAAAAATGAACATAGTCTGATGGAAGTGACACAGAAGGAATTGGTGAAGTTCAAAGCTATGACTGAGGAGTGCTTATCTGTGATGAGTACTTCTTTGAAGGGTATGCAGGGCATGTATGATGAATTGGTCACTTGGAAAACTAAAGTTGATCAACAGCTTGCAGAAATAGCCAATAAATTGAACGATCTTCAGTCACCTCAGGAACAAACTAATACGGGTTTGCCCCCAGAAGAATGGGAAGGTTGGCTAGAAAACTTCAACCTAGACAACATTCCAGGAGATGGACTTGTGGCTTGGTTAGATGGTACAGAAATGCTAGATGTTAAGCAAGAGGTTGTACACCATGATCCTATCTTACCGTTACCGTCTCCACCATGCTATAAAGAACCGAAAGATGCAAAGAGCAATTTGCTGGAGATCACTACTGAGAGACAACAGGAAGATCAACCTGACGTGACTCCTTGTTCTTCTATGACTCCTAGTCCAAAATCAGATCTAGACAACAACACATTCATAGTGTTTCAGGGGATGTTGATGGAGTTGTTTAAATGGAAAGATAAAATGGAGCAGCAGCTTTTAGAGGCATCAAATTCTGTACACATGCTGAAGATGAAGTATGGTACAGCCTGA 1317 0.4214 MEECGAFIDQLEGYKSKLSSRIPKDEEEDLENEDFKVKTIFIPKSKKRKQPSCNQLGEMKEELLDGEQGQGISKRKTKTHRSCNRWSDERYQQAEQRMWELLKAAGANFANPISRHALRKAARQHIGDTGLLDHLLKQIDGKIAPGGTERFRRCYNPQGIMKYWLESSHLDKARQEAGVQDPYWRPPSNFSAGNAPSQNTDSSCELKLLQIEMAKMKRDMQELIYKKQEKNEHSLMEVTQKELVKFKAMTEECLSVMSTSLKGMQGMYDELVTWKTKVDQQLAEIANKLNDLQSPQEQTNTGLPPEEWEGWLENFNLDNIPGDGLVAWLDGTEMLDVKQEVVHHDPILPLPSPPCYKEPKDAKSNLLEITTERQQEDQPDVTPCSSMTPSPKSDLDNNTFIVFQGMLMELFKWKDKMEQQLLEASNSVHMLKMKYGTA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00450 438 MobiDBLite consensus disorder prediction 176 201 - -
Accr8g00450 438 MobiDBLite consensus disorder prediction 372 392 - -
Accr8g00450 438 MobiDBLite consensus disorder prediction 61 84 - -
Accr8g00450 438 PANTHER PROTEIN DYAD 25 432 IPR044221 GO:0007131|GO:0051177|GO:0051321
Accr8g00450 438 Coils Coil 206 226 - -
Accr8g00450 438 Coils Coil 414 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00450 Accr-Chr8 6905847 6907839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00450 85 166 PHD Transcription Factor Family AT5G22260 40.964 5.23e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00450 - - gmx:100789912 451.825