LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr8g00416	ATGGATCCCGAAACATTCACCACCAGCATCTTCAAGTGGGACCCACGCACCATCCTCTCAACTTCCGCATTTAACCGCCCTCCGCTTCTCGAGTACACCATGGCTCCGCCGGCACTGCCCTCCGCCGCCGTAGTTAAGGGTTCCAGCAGGGAGGTCACGGGGCTGGATGAGTTGTTCCAAGCTTATGGGATTCGCTACTACACGGCGGCTAAGATAGCCGAGCTTGGTTTCACCGTGAGCACTCTCGTCAACATGAAAGACGATGAGCTTGACGAGATGATGAGCAGCCTCTCTCAGATTTTCCGTTGGGATCTCCTCGTCGGGGAACGTTACGGTATCAAAGCCGCCGTGAGAGCCGAACGAAGACGTATCGACGAAGAGGATTTACGGCGTCGTAACCTTCTCTCCACGGACACCACCACCACCATCGCACTTGACGCTCTCTCCCAAGAAGGGTTGTCGGAGGAACCGGTGGTGCAGCAAGAGAAAGAGGCGGGAGGCAGCACGTGGGAGGTGATTGCGGCGACGGAGAGGAGGAAGCAGCAGCGGAGGAGAACGAAGACGGCGAGGACGATGAAGACAAATCAGCACCACAACGACGATGAGAACGACGACGCGGAAGATGACGGCGAAGCAGAAGACATTATCGAAGAAGGAATGAACAATGGAGGATGCGAGAGACAGAGAGAGCACCCGTTCATCGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAACGGCCTGGATTATCTCTTCCACCTCTACGAACAATGCCGGGAGTTCTTAATCCAAGTCCAGAACATGGCCAAGGAACGCGGCGAGAAATGTCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGAGCCAGCTACATAAACAAGCCTAAGATGCGACATTACGTGCACTGCTATGCGTTGCACTGTTTAGACGAGGAGGCGTCGAATGAACTGAGGATGAGGTATAAGGAGAGAGGTGAGAACGTGGGCGCGTGGAGGCAGGCCAGTTATAAGCCGCTGGTGGCCATAGCGGCGCGTCAGGGTTGGGACATTGATGCCATCTTCAACGCCCATCCTCGTCTCTCTATTTGGTATGTCCCCACCAAGCTCCGTCAACTTTGTCACGCCGAGAGGAACAGCGCCGCCGCCGGAGCTTCCAGTTCTGTCTCTGTTGGAGGCGGTCATCTCACTTTCTGA	1209	0.5575	MDPETFTTSIFKWDPRTILSTSAFNRPPLLEYTMAPPALPSAAVVKGSSREVTGLDELFQAYGIRYYTAAKIAELGFTVSTLVNMKDDELDEMMSSLSQIFRWDLLVGERYGIKAAVRAERRRIDEEDLRRRNLLSTDTTTTIALDALSQEGLSEEPVVQQEKEAGGSTWEVIAATERRKQQRRRTKTARTMKTNQHHNDDENDDAEDDGEAEDIIEEGMNNGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNMAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNELRMRYKERGENVGAWRQASYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAAGASSSVSVGGGHLTF	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr8g00416	402	PANTHER	PROTEIN LEAFY	1	394	IPR002910	GO:0003677\|GO:0006355
	Accr8g00416	402	Pfam	DNA Binding Domain (C-terminal) Leafy/Floricaula	222	386	IPR035209	GO:0003677
	Accr8g00416	402	MobiDBLite	consensus disorder prediction	152	210	-	-
	Accr8g00416	402	Gene3D	Protein LEAFY	223	392	IPR038276	-
	Accr8g00416	402	Pfam	Floricaula / Leafy protein SAM domain	51	128	IPR035079	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr8g00416	1	384	Orphan Transcription Factor Family	AT5G61850	62.716	1.96e-157	448

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LFY	Accr8g00416		C_LFY_FLO	6e-107	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr8g00416	-		-	gmx:100798196	548.51