Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00415 ATGTCGGCCATGGTTTCTGCTCTTGCTCAGGTCATTGGAGCTTCACCTAATGTTTATGATCATCACAACCCTTTGACTGATCATATGACTCACTCAACTTCTGAAAACGCTCAACCATCTCTTCAACCTGATCATCAAGGGAGCACAAGGAAGAGACACTACAGAGGAGTAAGGCAAAGGCCATGGGGGAAATGGGCGGCTGAGATTCGTGATCCGAAGAAAGCTGCCAGAGTTTGGCTCGGAACCTTTGACACGGCGGAGGCAGCCGCGGTTGCCTATGATGAAGCCGCTCTCAGATTCAAAGGAAACAAAGCAAAGCTGAACTTCCCTGAAAGAGTTCAACTTCAACCACCTCCTTCCATGACAACAACGACGTCGTTTCCTTCTTCTTCAGGTGAATTTTCTTTCATCACAAATCCTCCTCCTCATCATCATCAACAACCACCACTTGTTCTTGCTCCTCCCACGACAACCTTGGCTTCACAACAACCTTATTATTATCATAATTACCAATATTATCAACATCAACAACATGTCCCGGCAAGTGGTGGTTGGAGTCACGGTTTGTTTTATTCTCCTCATCAACAACAACCACCTTCTTCGTCTTCCTCGTCTGGAATGTCCCACGACCAAAATGAACAAGAACAACAACTTCTACAGTTTTCCATGCAATTTGGAGGGTCCTCCTCTTCTACTTCTCATCCACCTTCCAATTGGCCATATCATGATTTTGATGCTAAACCTTGA 747 0.4538 MSAMVSALAQVIGASPNVYDHHNPLTDHMTHSTSENAQPSLQPDHQGSTRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAVAYDEAALRFKGNKAKLNFPERVQLQPPPSMTTTTSFPSSSGEFSFITNPPPHHHQQPPLVLAPPTTTLASQQPYYYHNYQYYQHQQHVPASGGWSHGLFYSPHQQQPPSSSSSSGMSHDQNEQEQQLLQFSMQFGGSSSSTSHPPSNWPYHDFDAKP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00415 248 MobiDBLite consensus disorder prediction 29 45 - -
Accr8g00415 248 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
Accr8g00415 248 MobiDBLite consensus disorder prediction 114 148 - -
Accr8g00415 248 Pfam AP2 domain 53 102 IPR001471 GO:0003700|GO:0006355
Accr8g00415 248 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Accr8g00415 248 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Accr8g00415 248 MobiDBLite consensus disorder prediction 189 238 - -
Accr8g00415 248 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Accr8g00415 248 MobiDBLite consensus disorder prediction 189 248 - -
Accr8g00415 248 Gene3D AP2/ERF domain 52 112 IPR036955 GO:0003700|GO:0006355
Accr8g00415 248 PANTHER DNA-BINDING DOMAIN 32 216 IPR044808 GO:0003700|GO:0009873
Accr8g00415 248 MobiDBLite consensus disorder prediction 19 59 - -
Accr8g00415 248 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Accr8g00415 248 MobiDBLite consensus disorder prediction 115 141 - -
Accr8g00415 248 SUPERFAMILY DNA-binding domain 53 111 IPR016177 GO:0003677
Accr8g00415 248 FunFam Ethylene-responsive transcription factor 2 52 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00415 Accr-Chr8 6426424 6428286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00415 1 128 AP2-EREBP Transcription Factor Family AT5G61890 58.333 5.41e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g00415 AP2 6.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00415 - - pcin:129308292 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00415 8 6426424 6428286 Accr8g00415 8 6426424 6428286 ECH
Accr8g00415 8 6426424 6428286 Accr2g02907 2 64939030 64940364 ECH