Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00405 ATGGCATCATCGGAGGTATCGATTAAGGGAAATGGTGTGAACGGGAAGGGGGAAGGTTTTGCTTCCGGTTACAACAACCATGACGATGCTAGGGACGTTACAGAGGGACAAAATGCTCATTCGTTAACCGGGAAAGAAGCAGAAGCTGCGCTTTACAGAGAGCTATGGCATGCCTGTGCTGGTCCTCTTGTTACAGTTCCTCGGGAAGGAGAGAGAGTTTTCTACTTCCCTCAAGGACACATAGAGCAGGTTGAGGCGTCTACCAATCAGGTGGCTGACCAGCATATGCCCGTGTACGATCTACCTTCCAAAATCCTCTGTCGGGTGATCAACGTGTTGCTGAAGGCAGAGCCAGATACTGACGAGGTGTTTGCCCAGGTCACCTTGGTTCCTGAGACTAATCAAGATGAAAACGCCGTGGAGAAAGAACCTCCACCTCCTCCACCGCCTCGATTTCACGTGCATTCGTTCTGTAAAACTCTGACTGCCTCTGATACAAGTACTCATGGTGGCTTTTCGGTTCTGAGACGACATGCTGATGAATGCCTGCCTCCTTTGGACATGTCTAAGCAGCCACCTACGCAGGAGTTAGTGGCAAAGGATCTGCATGGCAACGAGTGGCGATTCAGACATATCTTTCGTGGTCAACCTCGCAGACACTTACTGCAGAGTGGTTGGAGTGTTTTTGTCAGTTCCAAGAGGCTCGTTGCTGGGGATGCCTTCATATTTCTTAGGGGCGAGAATGGGGAGCTGCGTGTTGGTGTCAGGCGGGCAATGAGACAGCAGGGTAATGTTCCATCCTCAGTGATTTCCTGTCATAGCATGCATCTTGGTGTCCTTGCAACTGCTTGGCATGCTATCTCAACCGGCACCATGTTCACTGTTTATTACAAGCCAAGGACGAGTCCGGCGGAGTTTATTGTTCCATATGAACAATATATGGAGTCTCTAAAAAATAACTACACAATAGGGATGCGATTCAAAATGAAGTTTGAAGGTGAGGAGGCTCCTGAGCAAAGGTTTACTGGTACCATTGTTGGAATTGAAGATGCTGATGCCAACAGGTGGCCAAATTCCAAGTGGAGATACCTCAAGGTGAGATGGGATGAAACATCTAATATACCTCGTCCTGAAAGAGTCTCCCCTTGGAAAATAGAGCCTGCTGTTGCTCCTCCTGCTCTGAATCCTCTTACGATGCCCAGGCCTAAAAGGCCTCGCACTAATGTGGTTCCATTATCCCCTGACTCCTCTGTTCTTACTCGAGAAGCATCATCTAAAGTTAGTAAAGACCCTTCACAGGCAAGTGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATACTCGACCTTGAGAGGCAATTTTGCAGAAAGCAACGAGTCTGTTAGTGCAGACAAGTCTGTTGTGTGGCCACCTGCAGTAGATGATGAAAAGATTGATATGGTTTCCACCTCAAGAAGGTATGGGTCAGAGAGCTGGATGTCAATGGGGAGGCATGAGCCAACCTACTCAGATCTATTATCAGGCTTTGGAGCCAGTGGAGATTCTTTTCGTCCACCCTTTGCTGATCAGAATGTCCCTCTGGCTAGTCCTGCTAAAAAGCATTCATTGGAGCAAGAAGGGAGGTTTAATGTGCTAGCTAATCCATGGTCTGCTGGGCCCTCTGGTCTATCACTAAACCTCCCTAACTCAAATATCAAGGGTTCTGTGAATGGTGGTGATGTAACATATCAAACTCCAGGGAATGTGCGTTATGGTGCATTTGGGGACTACACTGTTCTCCATGGTCATAAAATCCAGCAATTACATGGGAATTCGTTGATGCCACCACCATCTACAACACAACATGAGAGTTCTCGTTCAAGAGAGTTGATGTCAAAACCATTATCTACACAAATAAGTGAGCCTGTCAAGCCAAAAGATGGGGATTATAAGCTCTTTGGCTTCTCACTTATCAGCGGCTCTGTTACGCCTGAGCCATCTGTATCCCAAAGAAATGTGATTAGTGAGTCACCAGGTCAAATGCATGTTGCATCTTACAATTCTCATGAAAGTGATCATAAATCAGAACAACTGAGGGGCTCAAAACCAGCTGATGTAGCTCCCGTTGATGATCCAGAGAAGTCGTTGCAAGTTTCTCAGACACATCTGAAAGAGGTTCAAGCCAAACCACCTAGTGGTTCTGCTAGGAGCTGCACTAAAGTACACAAGAAAGGAATTGCACTTGGTAGGTCAGTGGACCTCACTAAGTTCAGCAACTATGAAGAATTAGTTGTTGAACTAGACCAGCTGTTTGAATTTGGTGGTGAATTAATGTCCCCTAAAAAGGATTGGCTTATTGTCTATACTGATGATGAGGGTGACATGATGCTTGTTGGGGATGATCCATGGCAGGAGTTCTGTGGCATGGTTCGCAAAATTTATATCTATCCCAAAGAGGAGATTCAAAAAATGAGCCCAGGTACACTAAGTTCAAGGAATGAAGAGAATCAGTCAGCTAGTGAAGGTGCAGACGCCAAAGTTGAATGTCAGTGGCATCATCCAGCTTCGCTGCCTGATAATTTCTAG 2562 0.4649 MASSEVSIKGNGVNGKGEGFASGYNNHDDARDVTEGQNAHSLTGKEAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVLLKAEPDTDEVFAQVTLVPETNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISCHSMHLGVLATAWHAISTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMKFEGEEAPEQRFTGTIVGIEDADANRWPNSKWRYLKVRWDETSNIPRPERVSPWKIEPAVAPPALNPLTMPRPKRPRTNVVPLSPDSSVLTREASSKVSKDPSQASGFPRVLQGQEYSTLRGNFAESNESVSADKSVVWPPAVDDEKIDMVSTSRRYGSESWMSMGRHEPTYSDLLSGFGASGDSFRPPFADQNVPLASPAKKHSLEQEGRFNVLANPWSAGPSGLSLNLPNSNIKGSVNGGDVTYQTPGNVRYGAFGDYTVLHGHKIQQLHGNSLMPPPSTTQHESSRSRELMSKPLSTQISEPVKPKDGDYKLFGFSLISGSVTPEPSVSQRNVISESPGQMHVASYNSHESDHKSEQLRGSKPADVAPVDDPEKSLQVSQTHLKEVQAKPPSGSARSCTKVHKKGIALGRSVDLTKFSNYEELVVELDQLFEFGGELMSPKKDWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYIYPKEEIQKMSPGTLSSRNEENQSASEGADAKVECQWHHPASLPDNF 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00405 853 CDD B3_DNA 155 257 IPR003340 GO:0003677
Accr8g00405 853 Gene3D - 724 817 - -
Accr8g00405 853 SMART B3_2 157 259 IPR003340 GO:0003677
Accr8g00405 853 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
Accr8g00405 853 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
Accr8g00405 853 MobiDBLite consensus disorder prediction 394 437 - -
Accr8g00405 853 MobiDBLite consensus disorder prediction 817 853 - -
Accr8g00405 853 MobiDBLite consensus disorder prediction 600 636 - -
Accr8g00405 853 MobiDBLite consensus disorder prediction 603 631 - -
Accr8g00405 853 Gene3D - 154 259 IPR015300 -
Accr8g00405 853 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 50 817 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr8g00405 853 MobiDBLite consensus disorder prediction 1 41 - -
Accr8g00405 853 Pfam Auxin response factor 283 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr8g00405 853 FunFam Auxin response factor 724 817 - -
Accr8g00405 853 FunFam Auxin response factor 155 259 - -
Accr8g00405 853 MobiDBLite consensus disorder prediction 817 832 - -
Accr8g00405 853 MobiDBLite consensus disorder prediction 410 437 - -
Accr8g00405 853 Pfam AUX/IAA family 716 815 IPR033389 -
Accr8g00405 853 Gene3D - 320 391 - -
Accr8g00405 853 SUPERFAMILY CAD & PB1 domains 731 805 - -
Accr8g00405 853 ProSiteProfiles PB1 domain profile. 728 810 IPR000270 GO:0005515
Accr8g00405 853 SUPERFAMILY DNA-binding pseudobarrel domain 153 286 IPR015300 -
Accr8g00405 853 FunFam Auxin response factor 320 392 - -
Accr8g00405 853 MobiDBLite consensus disorder prediction 676 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00405 Accr-Chr8 6246250 6250631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00405 1 838 B3 DNA Binding Superfamily AT5G62000 65.000 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr8g00405 B3 1.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00405 - - gmx:100815956 1333.55