Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00401 ATGGCACAACAGCAAAAGCAAAACCACGCCCCTGCCATCATCATCCCTCTTCGACACCAGGGCAAAGACGAAGATAAGGAATTGGAACTTGGATCTGAGGAGCCTGAGGCCCCATTGCCTCTAACTGCTACTTCCAGGGTCTTGTATATGTTGGGAGATATCGCGGCTGGGCCTGCGTTTAGGTTTACGCAATGGCTCGAATCGGTTCGTAAACGCACTGCCAGAAATCCTTCGTCCGGCTTCCCCCACCGCCCTACGAGGCTTCCCGATGCTATGCCTTCTAGTGCAGAAGGATCAATGGACGATCCAAAATGTGATTCACCTCCTGTGCAAACAACAGAACTTAGTTTGTGGGAGAGGCTTGGTAATGCTGCTATGTTGGATATTGAATCTAGCTCTTTTTCTTGGGAGAGGCTCTCTTCACTGCATCACACTGAACACAGCAGCAGCACCGACCATTCCGAAGATGAGATGAACAAAGCTCTTGAGGTAACCGTAAATTCTGGGGGAGTTGTCTTCTTCGCTTTCTTTAATCGCCTTGGGAGCGATGATACTTCTCCAAAGGAGGAGGCTGCTGTAATAAAAATATCATCATCAAGAATGGCAACACAATCTGAACGCCTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGCTAGAGTTGTTCACAATACCAGTCCAGAGTGGTTTCAAATAAAGGAAGCTGCAGAAAAAGCTAGAAATAAAGCATTTTCTGAAGGAGATGAAATTGGTGAAATGACTTGTTTAGAACTTTTGGAAGCACTTGAGCTGAGTAGGTGCCTCTTTTTTATGAGTTATATACATGGGTCACCTTTACTAGAAAGTTCAAGTGCATTTGAGTCTCAGGAATCCGCTGAAAGAACAGCAGCAGCTCTTGGTAGGGTATTGATGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCCTGCCGTCAGCTTAGGTGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGATGTCTGTAACTACTAACTCACTTGAAAAAGCCTTAGATTCTGCCATGAATCAATATAGACCAAGGGTGATGAGGGCACTTCAAAAAGAAAGAAGATCAACTTCAATAGGTATCAGAATGAGTTCTAATAATCCTGGATTGCTTTCACAGGCCTCTGATATTTCTGATATCTCAGAATCACCAAGTTGTAGTGACATGAGCCTTGAAGGTCCAACTTCTGGTGAACCACAATGTACTGACATTGTGGCTATTGATTCTGGTGTTCCTCGTCGGCCCCCTGCTGGAAAACGATCAGATGATCAGGCTAACTATCCCAAGTTAGTTGAGTTACTAATCAATAGTTCTGGGTTTTGCTCTAACCTGTTACATGATATCACCGGTGGAAAATTAGGAACTCCTTCACTAGAAGAAATTAATAAAACTACTGATGCACATGCAAGTGAGACAGCAGCAGCAGTTCATGAGTTTCGTAGTGGTTTCCGTGCTGCTCTTAGAGATCTTCAGGGATTTCATATATTCCTACTTACTCTACACCAAAAGCTCGATAGCTTATTACGGTCATTTATGAGCATTATAAGCAAAATATCATCAGGGGAGCCTGACAAAGAGGATTCAATGGCTCCTGATTCTCCTTCACTAAATACTGGAGAAGGTAGTTGTCCATCTCCAGCAAGCAAGGATAGGTCTGTTATTGAAAACCCTTCAGATTATGGTGATTCAGAATCACAAAGAACTGCTCCAAAGGCATCATGGTCGGGGAGTAAAGAAAATTCTGATATTGCTTCTCCTATGTCAAGGGAAGGTTGGCATGGAAAGTTTTATAAAGGAAGTGGGGATCCACTTCGTAGTAGTCTTCGGTTGACAGCAAAGCTACGCGACTTCCATAAATATGCAAAGGTTGATGCAGAGTCTACTAAAGAATTAGAACAGTGGAATGAAACACTTAAAAATGATGCCATCAAGCTATGTCAGGACAACAATTTCAATTCTGGATTTTTTGAGTGCAGCGATAATAACAGCGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATTCTTGAAAGGATTACATTAATCTCTGAGGCTGCAAATACAGAGAAGCCATCTGCTGTTACAAATAGTCTATTCATTGGGGGAGCACTGGCTGCAAGATCTGTATACACACTGCAACACTTGGGAATCACTCATATTCTGTGTTTGTGCACGAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTACAAAAATTTCTATGTTTTTGATGATGTAGATTGTAACATCAGCAGCATATTTGAAGAAGCCTGTGATTTTATAGATCATGTTGAACAGAAAGGCCAGAGAATTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGCGTGACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAAGTTCACTTTATCAGAAGCATGGAATACTCTGAAACGAGTTCATCGTCGAGCACAACCCAACGATGGCTTCGCAAAGATCTTACAGGAACTGGATAAGAAACTGCATGGGAAGGTTTCTATGGAGTGGCAGCAAAGGAAACCAATGATGAAGGTTTGTCCGATATGTGGAAAAAAGGCGGGACTAAGCAGCAGCTCCCTTAAGCTTCATCTGCAGAAATCCCATAAAAAGCTATCTTCAGGGAGTGTGGACAGTGCCATGACAATGGAGATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGTGGTGGGAGTGTCAGCCCCACGCAAAGGCAGCCTAGTTCAATAGTGGATGAGTGA 2808 0.4298 MAQQQKQNHAPAIIIPLRHQGKDEDKELELGSEEPEAPLPLTATSRVLYMLGDIAAGPAFRFTQWLESVRKRTARNPSSGFPHRPTRLPDAMPSSAEGSMDDPKCDSPPVQTTELSLWERLGNAAMLDIESSSFSWERLSSLHHTEHSSSTDHSEDEMNKALEVTVNSGGVVFFAFFNRLGSDDTSPKEEAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVVHNTSPEWFQIKEAAEKARNKAFSEGDEIGEMTCLELLEALELSRCLFFMSYIHGSPLLESSSAFESQESAERTAAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMMSVTTNSLEKALDSAMNQYRPRVMRALQKERRSTSIGIRMSSNNPGLLSQASDISDISESPSCSDMSLEGPTSGEPQCTDIVAIDSGVPRRPPAGKRSDDQANYPKLVELLINSSGFCSNLLHDITGGKLGTPSLEEINKTTDAHASETAAAVHEFRSGFRAALRDLQGFHIFLLTLHQKLDSLLRSFMSIISKISSGEPDKEDSMAPDSPSLNTGEGSCPSPASKDRSVIENPSDYGDSESQRTAPKASWSGSKENSDIASPMSREGWHGKFYKGSGDPLRSSLRLTAKLRDFHKYAKVDAESTKELEQWNETLKNDAIKLCQDNNFNSGFFECSDNNSVDAYELKVRLEHILERITLISEAANTEKPSAVTNSLFIGGALAARSVYTLQHLGITHILCLCTNEIGQSDSQFPDLFEYKNFYVFDDVDCNISSIFEEACDFIDHVEQKGQRILVHCFEGRSRSVTLVLAYLMLRKKFTLSEAWNTLKRVHRRAQPNDGFAKILQELDKKLHGKVSMEWQQRKPMMKVCPICGKKAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGGSVSPTQRQPSSIVDE 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00401 935 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 776 828 IPR000387 GO:0016311|GO:0016791
Accr8g00401 935 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 10 933 IPR035010 GO:0004721|GO:0009737|GO:0043622
Accr8g00401 935 SMART dsp_5 707 849 IPR020422 GO:0006470|GO:0008138
Accr8g00401 935 SUPERFAMILY Protein kinase-like (PK-like) 64 440 IPR011009 -
Accr8g00401 935 MobiDBLite consensus disorder prediction 918 935 - -
Accr8g00401 935 MobiDBLite consensus disorder prediction 1 34 - -
Accr8g00401 935 Gene3D - 282 534 IPR036940 -
Accr8g00401 935 MobiDBLite consensus disorder prediction 547 600 - -
Accr8g00401 935 Pfam Dual specificity phosphatase, catalytic domain 720 847 IPR000340 GO:0008138|GO:0016311
Accr8g00401 935 Pfam Actin-fragmin kinase, catalytic 114 393 IPR015275 -
Accr8g00401 935 MobiDBLite consensus disorder prediction 73 110 - -
Accr8g00401 935 Gene3D Protein tyrosine phosphatase superfamily 689 862 IPR029021 -
Accr8g00401 935 MobiDBLite consensus disorder prediction 536 603 - -
Accr8g00401 935 ProSiteProfiles Dual specificity protein phosphatase domain profile. 707 852 IPR020422 GO:0006470|GO:0008138
Accr8g00401 935 MobiDBLite consensus disorder prediction 916 935 - -
Accr8g00401 935 FunFam Dual specificity protein phosphatase PHS1 679 853 - -
Accr8g00401 935 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 707 852 IPR029021 -
Accr8g00401 935 CDD DSP 708 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00401 Accr-Chr8 6163706 6172868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00401 20 920 Protein tyrosine phosphatase (PTP) family AT5G23720 66.447 0.0 1155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00401 K14165 - cit:102630871 1305.43