Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00394 ATGAAAGAATCGGAGAACGATATTCTCAACCTGTCCGTTCAGCTTCTTTCTTCTCTTCTGGATGAGATTCCCGCTGTTGTTAACTTCAAAGGTAAATGGTCTCTAATTAGAGCCAAACTGTTCGATCTTCAGACTCAACTCACTGATTTCTCCTCTGAGTTCCCCAATTACTCCTCCAATTCTCTTTCACTCGAGCTACTTCAGTCCATTTCAGACACCCTCAACGATGCCGTTTCGCTTGCCAAAGAATGCCAGTCCCCAGACTTGTCCCAGGGAAAGCTTAAGACTCAGAGCGACATTGATTCGGTCCTCGCTAAGCTGGATCGTCACGTTAAAGACTGCGAGATTCTGTTCAGAAGTGGGGTTTTGCAAGACGCCGCCGTTTCCAGCGCGTCTAAGAGAGAGGCCGTTCGGTCTGAATCCAGGAACTTGATTACTCGTCTGCAAATCGGTTCTGCTGAGTCCAGGAAATCAGCGATGGATTCCTTGTTGGGTTTGCTCGAAGAGGATGATAAGAATGTGATGATAGCTGTGGCGCAGGGTGTGGTTCCAGTGCTTGTCCGCTTACTGGATTCTGCGTCTTACGAGATGAAGGAGAAGACTGTTGCTGCCATAGCCAGAGTCTCCATGGTGGATAGTAGCAAGCATGTTTTGATCGCTGAGGGTTTGTTGCTTCTGAATCAATTGGTCCGAGTTCTCGATTCGGGGAGTGGATTTGCCAAACAGAAATCTTGCTTAGCCCTCCAGGCTCTAAGTTTTTCCAAAGAGAATGCTAGAGCAATCGGTTCTAGTGGTGGAATCTCATCACTTTTAGAGATTTGTCAAGCCGGCACTCCTGGTTCCCAAGCTTCAGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTCCCTGAAATTAGAGAGAATTTTATAGAGGAAAATTCCGTTGTTGTTCTATTGGGGCTCGCCTCATCGGGAACTGCATTAGCGCAAGAAAATGCAATTGGGTGTTTGTCCAAGTTAGTTTCTGAAGACGAAAGTTTGAAACTTTTGTTTTTAAAGGAAGGAGGGATCGAGTGCCTGAAGAATTTTTGGGACTCAGCTCCTACAGTTCGGAGTCTTGAAGTCGCAGCCGAGTTGTTGAGTCATCTGGCTTCTAATTCGCCGATTGCTGAAGTTCTTGTTTCTGATGGGTTTATACTCCGCCTTGTGGGTGTGTTGAATTGTGGAATTCTAGGGGTGAGAACTGCGGCAGCTCGAGCTGTTTATGCTTTGGGGTTGCACAACACAAAATCTAGGAAGGAGATGGGTGAATGTGGTTGTATGACCCCATTGATCAAGATGCTGGATGGCAAAGCTGTAGAAGAGAAAGAAGCGGCCGCTAAAGCATTGTCGGTACTCATGTTGTATGCGGGAAATAGAAAAATTTTCCGGAAGGATGAGAGGGGAATAGCTAGTGCTGTTCAGCTGTTGGATCCTTCAATACAGAATTTGGACAAAAAATATCCTGTTTCTGTGCTGACCTCGCTTGTGCATTCAAAGAAATGCAGGAAACTTATGGTGGCGGCTGGTGCTTGTGTATATACGCAAAAGCTTGTTGAGATGGATGTCGAGGGTGCCAAGAAGCTCTTGGACAGCCTTGGCAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.4632 MKESENDILNLSVQLLSSLLDEIPAVVNFKGKWSLIRAKLFDLQTQLTDFSSEFPNYSSNSLSLELLQSISDTLNDAVSLAKECQSPDLSQGKLKTQSDIDSVLAKLDRHVKDCEILFRSGVLQDAAVSSASKREAVRSESRNLITRLQIGSAESRKSAMDSLLGLLEEDDKNVMIAVAQGVVPVLVRLLDSASYEMKEKTVAAIARVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCLALQALSFSKENARAIGSSGGISSLLEICQAGTPGSQASAAGVLRNLSVFPEIRENFIEENSVVVLLGLASSGTALAQENAIGCLSKLVSEDESLKLLFLKEGGIECLKNFWDSAPTVRSLEVAAELLSHLASNSPIAEVLVSDGFILRLVGVLNCGILGVRTAAARAVYALGLHNTKSRKEMGECGCMTPLIKMLDGKAVEEKEAAAKALSVLMLYAGNRKIFRKDERGIASAVQLLDPSIQNLDKKYPVSVLTSLVHSKKCRKLMVAAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00394 551 Gene3D - 362 527 IPR011989 -
Accr8g00394 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Accr8g00394 551 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Accr8g00394 551 Gene3D - 130 361 IPR011989 -
Accr8g00394 551 SMART arm_5 379 419 IPR000225 GO:0005515
Accr8g00394 551 SMART arm_5 170 210 IPR000225 GO:0005515
Accr8g00394 551 SMART arm_5 254 294 IPR000225 GO:0005515
Accr8g00394 551 SMART arm_5 421 461 IPR000225 GO:0005515
Accr8g00394 551 SMART arm_5 337 378 IPR000225 GO:0005515
Accr8g00394 551 SMART arm_5 295 335 IPR000225 GO:0005515
Accr8g00394 551 SUPERFAMILY ARM repeat 143 489 IPR016024 -
Accr8g00394 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00394 Accr-Chr8 5905343 5906998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00394 126 410 U-box Gene Family AT2G23140 27.431 3.25e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00394 - - qsa:O6P43_030678 817.379