Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00392 ATGGATGACGGCTGCCAGCATGAAAATGGAAGGCATAAGGTGGACTATTACAGAGGAACACATTCCCTGTGGAATATGGCTCCTCAACATCAAACAAAGGAACCGAATGCGTTAGTTATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAAGCTGCTATACGAGAACGGAATGCAGCTTTATCTGAAAAGAATGATGCCTTGGCTGCTCGCGATGAGGCCTTTCGGCAGAGGGATGAAGCACTAGTTCAGAGGGATAAAGCCATGATAGAACGAGATAATGCCCTTGCTGCACTTCAAATCCAGGACAATGCTGTCAACTTCCAACTGGGTAGTGGAATTCAACGTGGATCAAAGCGAATGCACCACTCCTCAAACCATCTTGTTGAAATGGCAGAAGCTGCATACAACACAAAGGATGCCACCATAACTGAGGCCTTCCCAGTGACTGTAATAAATTCTGAAGCTGTTAAATCTCCTCAGGCAAAGAGAAAAAAGGAAGACAAGGCAATTTCTTCTAAGGCAATGAAAAGCAAAGGAAAGAAAATGGGTGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACTAAAATTAAATCTGAGTGGGATAGACAGGATATTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCCAGCCCCAGTTTGCACATGCACTGGAGTACCACGGCAGTGCTACAAATGGGGAAATGGCGGGTGGCAGTCATCCTGTTGCACCACCTCCTTGTCAATGTATCCATTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATTGGTGGCCGGAAGATGAGCGGAAGTGTCTTTACAAGACTGCTCAGTAGGGTAGCAGCAGAAGGCCAAGATTTATCTATGCCATTGGATCTCAAGGATTACTGGGCCAGACATGGGACAAATCGCTACATCACAATCAAGTAG 942 0.449 MDDGCQHENGRHKVDYYRGTHSLWNMAPQHQTKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNDALAARDEAFRQRDEALVQRDKAMIERDNALAALQIQDNAVNFQLGSGIQRGSKRMHHSSNHLVEMAEAAYNTKDATITEAFPVTVINSEAVKSPQAKRKKEDKAISSKAMKSKGKKMGEDLNRSASSEGTKIKSEWDRQDIGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSMPLDLKDYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00392 313 PANTHER - 1 313 IPR010409 -
Accr8g00392 313 MobiDBLite consensus disorder prediction 160 189 - -
Accr8g00392 313 SMART GAGA_bind_2 1 313 IPR010409 -
Accr8g00392 313 MobiDBLite consensus disorder prediction 159 198 - -
Accr8g00392 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00392 Accr-Chr8 5884582 5885639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00392 1 313 BBR or BPC Transcription factor family AT2G21240 60.317 8.72e-137 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Accr8g00392 GAGA_bind 1.2e-100 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00392 - - jre:108986984 524.242